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scnpilot_solids2_trim150_scaffold_2617_15

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(10571..11341)

Top 3 Functional Annotations

Value Algorithm Source
LytTR family transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WY31_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 68.0
  • Coverage: 259.0
  • Bit_score: 353
  • Evalue 2.00e-94
response regulator of the LytR/AlgR family similarity KEGG
DB: KEGG
  • Identity: 68.3
  • Coverage: 259.0
  • Bit_score: 349
  • Evalue 6.90e-94
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.8
  • Coverage: 254.0
  • Bit_score: 365
  • Evalue 7.10e-98

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Taxonomy

RIFOXYA1_FULL_Xanthomonadales_69_10_curated → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 771
ATGGCTAAGGGTGTGATCGCCGAAGACGAGGTCTTGCTGCGCCAGTCGCTGCGTGCCGCGCTGGAGACGGCATGGCCGCAACTGGACATCGTCGCCGAGTGCGAGGACGGCGCCAGCGCGCTGGAGGCGATCGTCGAGCATCGGCCCGAGGTGGCTTTCCTCGACATCCGCATGCCGGGCCTGACCGGGCTGGAGGTCGCCACCGCCGCGGCCGAGGCGTGCCCGGCGACCCAGGTGGTGTTCGTCACCGCGTATGACCAGTACGCCATCGACGCCTTCGAGCGCGGCGCGATCGACTATCTGCTCAAGCCGGTCGTCCCGGAACGGTTGCGCGCCACCGTGGAGCGCGTGCAGTCGCGCGTGGGCGCGGATCGGTCCGACACTGCCTCGCTGGCCGACCTGGTCCGGCAGATCGGCAGCCGGCTGGGGCCGGCGCGCCAGCAACCGCCGCTGAGCTGGGTCACCGCCAGCACGGGACGGGAAACGCGGCTGATCCTGCTCGACGACGTCGCCTATTTCCGCGCCGACAACAAATACACCACGGTGGTCACTGCCGAGGGCGAGGCGCTGCTGCGCACTCCGATCCGCGAGCTGCTGGAGGTGCTCGACCCGACCGTGTTCAAGCAGATCCACCGCGGCACCGTGATCAACATGAAGGCGGTCGCCGCCGTCACCCGCGACGACACCGGCAAGGGCATCGTGCGCCTGCGCGAGCGGCCGGAAACGCTCAGCGTGAGCGCGCCGTTCATGACCCTGTTTCGCAACATGTAA
PROTEIN sequence
Length: 257
MAKGVIAEDEVLLRQSLRAALETAWPQLDIVAECEDGASALEAIVEHRPEVAFLDIRMPGLTGLEVATAAAEACPATQVVFVTAYDQYAIDAFERGAIDYLLKPVVPERLRATVERVQSRVGADRSDTASLADLVRQIGSRLGPARQQPPLSWVTASTGRETRLILLDDVAYFRADNKYTTVVTAEGEALLRTPIRELLEVLDPTVFKQIHRGTVINMKAVAAVTRDDTGKGIVRLRERPETLSVSAPFMTLFRNM*