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scnpilot_solids2_trim150_scaffold_4604_6

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(4213..5082)

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.2
  • Coverage: 276.0
  • Bit_score: 479
  • Evalue 2.90e-132
diaminopimelate epimerase (EC:5.1.1.7) similarity KEGG
DB: KEGG
  • Identity: 81.4
  • Coverage: 280.0
  • Bit_score: 475
  • Evalue 1.20e-131
Diaminopimelate epimerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBT1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 82.2
  • Coverage: 276.0
  • Bit_score: 479
  • Evalue 2.10e-132

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 870
ATGGCGCCGGCGCCACTGCGCTTTTCCAAGATGCACGGCAGCGGCAACGACTTCGTCGTGCTGGACTGCCGGCGGCAGGCGTTCGCGCTCGACGCGGTGCAGATCCGCGCGCTGGGTGATCGCCACACCGGCGTGGGCTTCGACCAGCTGCTCAGCGTGGAGCCGGCGCGCGATCCGTCGTGCGCGTTCTACTACGGCATCTGGAACACCGACGGCTCGCCGTCAGGCCAGTGCGGCAACGGCGTGCGCTGCGTGGCGGCGTGGTTGCATCGTGCCGGCGCGCTGGCGCTGGACCAGGCGGTGCGCATCGAGAGTCCGTCCGGCCCGGTGACGGTGCGCGTGCTCGCACCCGACCAAGTCACCGTAGACATGGGCGAGCCGATCTTCGAACCGGCGCGGATTCCGTTCGCGGCCGCGGCGACGGCCGCGCATTACCCGATCGAGGTCGGCGGCGACACGCTGGACATCGGCGCCGTCTCGATGGGCAATCCGCATGCGGTAGTGACGGTCGATGACCTGGCCGATCCCGCGCTGGAACGGCTCGGCCCGCTGCTGACCCGGCATCCGCGCTTCGCCGAAGGCGCCAACACCGGCTTCGTGCAGCGGCTGGACCGCAGCCACCTGCGCCTGCGCGTGCACGAGCGCGGCGCCGGCTGGACCCGCGCCTGCGGCACCGGGGCCTGCGCCGCGATGGCGGTGCTGCACCGGCGTGGCGAAGTGGATGAGCGCGTCGCGGTGGCGCTGCCCGGCGGCAGCCTGCGCATCGACTGGGCCGGCGCCGGCCATGCGCTCTGGATGACCGGCCCGGCGGCCTTCGTTTTCGAGGGCGAATGGGCGCTTCCCCGCGTCGAACCGCCGCCGGCCGGTTGA
PROTEIN sequence
Length: 290
MAPAPLRFSKMHGSGNDFVVLDCRRQAFALDAVQIRALGDRHTGVGFDQLLSVEPARDPSCAFYYGIWNTDGSPSGQCGNGVRCVAAWLHRAGALALDQAVRIESPSGPVTVRVLAPDQVTVDMGEPIFEPARIPFAAAATAAHYPIEVGGDTLDIGAVSMGNPHAVVTVDDLADPALERLGPLLTRHPRFAEGANTGFVQRLDRSHLRLRVHERGAGWTRACGTGACAAMAVLHRRGEVDERVAVALPGGSLRIDWAGAGHALWMTGPAAFVFEGEWALPRVEPPPAG*