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scnpilot_solids2_trim150_scaffold_4656_3

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(1912..2700)

Top 3 Functional Annotations

Value Algorithm Source
Virulence protein SciE type n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0S1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 263.0
  • Bit_score: 468
  • Evalue 4.30e-129
Virulence protein SciE type {ECO:0000313|EMBL:EIL93062.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 263.0
  • Bit_score: 468
  • Evalue 6.10e-129
sciE; hypothetical protein; K11898 type VI secretion system protein ImpE similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 259.0
  • Bit_score: 292
  • Evalue 1.70e-76

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 789
ATGACACCCGAAAGCAAGCTCAAAGAAGGCCGGCCGGACGAAGCGTTGCAACTGCTCACGGCGGAAGTACGCAACAACCCGGCAGATGCCAAGCGCCGGGTTTTTTTATTCCAGTTGCTGGCGCTGCTCGGACAATGGGAGCGGGCACAGAACCAGCTCAGCGTCTGCGGCGAACTCGACCCGCTCAACGCCATGATGGTCGGTGCCTATTCGGAGGCGCTGAAGGGCGAACTGGTGCGCGCCGACGTCTTCGCCGGCAAACGCATGCCGGTGATCATCGGCGAGCCGGAACCCTGGCTGGCGTGGCTGCTGCAATCGCTCAAGCTCGGCGCCGAAGGCAGGCACGAGCAGGCCGCGACGCTGCGCGAGCAGGCACTGGAACAGGCTCCCGCGGTGGCGGGCAACATCGACGGCGCCGCGTTCGAGTGGATCGCCGATGCCGACCCCCGCATCGGGCCGTGCCTGGAGATCATCGTCAACGGCGGCTACTCCTGGGTACCGTTCTCGCGCCTGCGCGAGCTGAAATTCGAGGCCCCGAGTGATCTGCGCGACAAGATCTGGGTGCCCACCCAGGTGACATGGAGCAATGGCGGCCAGGCCATCGGCTTCATTCCGGGGCGTTACGCCGGCAGCGAACGGTCCGAGGACCAGGACATCGTGCTCGGGCGCAAGACCGACTGGGTGGAGCAGGGCAGCGACCAGATCGGTCTGGGACAGCGCATGCTGGCCACCGACGTGGCCGACTATCCGCTGCTCGACGCGCGACTGATCACCTTCGACGTCGCCTGA
PROTEIN sequence
Length: 263
MTPESKLKEGRPDEALQLLTAEVRNNPADAKRRVFLFQLLALLGQWERAQNQLSVCGELDPLNAMMVGAYSEALKGELVRADVFAGKRMPVIIGEPEPWLAWLLQSLKLGAEGRHEQAATLREQALEQAPAVAGNIDGAAFEWIADADPRIGPCLEIIVNGGYSWVPFSRLRELKFEAPSDLRDKIWVPTQVTWSNGGQAIGFIPGRYAGSERSEDQDIVLGRKTDWVEQGSDQIGLGQRMLATDVADYPLLDARLITFDVA*