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scnpilot_solids2_trim150_scaffold_4243_1

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(61..474)

Top 3 Functional Annotations

Value Algorithm Source
succinate dehydrogenase subunit D (EC:1.3.5.1) similarity KEGG
DB: KEGG
  • Identity: 84.4
  • Coverage: 135.0
  • Bit_score: 237
  • Evalue 2.00e-60
Succinate dehydrogenase membrane anchor subunit n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPA6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 135.0
  • Bit_score: 245
  • Evalue 4.10e-62
Succinate dehydrogenase membrane anchor subunit {ECO:0000313|EMBL:EIM01298.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 135.0
  • Bit_score: 245
  • Evalue 5.70e-62

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 414
ATGAACCTGCGTGTGGGAACCGACGACGTCCGCAGCCAGCTGCGCAATCCGATGAAACTCGCCCGCGGACTGGGTTCGGCGAAATCCGGCGTGGAGCACTGGTGGGTGCAGCGGTTGACCGCGGCCGCGCTGGTGGTGCTGGGCATCTGGTTCGTGATCACCGTGCTCGGCCTGCTGCACGCGGATTACGCGGCGGCGCGCGCGACGGTGGCCAAGCCGTGGAATGCGCTGCTGCTGATCGTGTTCGTGCTGACCATGTTCTGGCATGCCGTGCTGGGCTTGCAGGTGGTGGTCGAGGATTACGTGCACACCCGCTGGAAGGAGGTCGTGCTACTCGTGGCGATCAAGTTCCTCGCGGTGCTGGGCGCACTGGCTGGCGTGCTGGCCGTGTTGCGCGTGGCGCTGACCCCCTGA
PROTEIN sequence
Length: 138
MNLRVGTDDVRSQLRNPMKLARGLGSAKSGVEHWWVQRLTAAALVVLGIWFVITVLGLLHADYAAARATVAKPWNALLLIVFVLTMFWHAVLGLQVVVEDYVHTRWKEVVLLVAIKFLAVLGALAGVLAVLRVALTP*