ggKbase home page

scnpilot_solids2_trim150_scaffold_4243_6

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(3043..3531)

Top 3 Functional Annotations

Value Algorithm Source
17 kDa surface antigen n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W040_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 79.5
  • Coverage: 166.0
  • Bit_score: 259
  • Evalue 1.90e-66
outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 166.0
  • Bit_score: 254
  • Evalue 2.50e-65
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.7
  • Coverage: 166.0
  • Bit_score: 265
  • Evalue 4.80e-68

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 489
ATGACTGCACGCATTGCAAAACTTGCACTGGCCGCATCGATGACGACGGGCCTCGCCCTCGCCGGTTGCGCGACCCAGCCTTACGGCAACAGCAACAACGGCTACTACGGAGGCCAGTCGTCGGCTTACGGCAACCAGCCGGTTCGCTGCAACACCTGCGGCGTGGTGCAGGAGGTTCAGCAGGTGTATCTGGAGAACAGCGGCAACGGTGGCACGCTGGGTGCGATCATCGGCGCGGTGGCCGGCGGCGTGCTCGGCAACCAGGTCGGCAAGGGCGATGGCCGCAAGGCCGCGACCGTGGCCGGCGCGGTGGCCGGCGGCGTGGTCGGCAACCAGGTCGGCAAGCGCAGCGGTGGCGACAAGGTGGCCTGGCGCATCGTTGTCCGTCTGGACGACGGACGCTACGCCACCGTGACCCAGCGCGAGAACCCCGGCCTGCGCCAGGGCGACTACGTCGAGGTGCGCGGCGATCACGTCTACCCGCGCTGA
PROTEIN sequence
Length: 163
MTARIAKLALAASMTTGLALAGCATQPYGNSNNGYYGGQSSAYGNQPVRCNTCGVVQEVQQVYLENSGNGGTLGAIIGAVAGGVLGNQVGKGDGRKAATVAGAVAGGVVGNQVGKRSGGDKVAWRIVVRLDDGRYATVTQRENPGLRQGDYVEVRGDHVYPR*