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scnpilot_solids2_trim150_scaffold_2864_7

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: 6119..6892

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 256.0
  • Bit_score: 395
  • Evalue 6.40e-107
Pseudouridine synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4ND80_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 78.5
  • Coverage: 256.0
  • Bit_score: 395
  • Evalue 4.60e-107
pseudouridine synthase family protein similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 256.0
  • Bit_score: 395
  • Evalue 1.40e-107

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 774
ATGTCCCGTCCTTCTTCCTTCCACCCGGCGCGCGCGACCGGGCCGACTCCGCCGTCGCGCTACGGGCTTGCCCGCGTGCTGTCCAAACTGGGTGTGTGCTCGCGCAGTCAGGCCGAGCAGTGGATTCGTGCGGGCCGGGTCAGTGTGGGCGGGCGGGTCGTCCGCGACCCCCAGCATCCGACCCTGATCGACCGCCAGGGGATCGCCATCGACGGCGAAGCCGTGGGCCGGGCCACGCCTGTCCACGTGGCCTTCAACAAGCCGCGCGGCATCGTGGTCAGCGCGGCCGACGAGCATGGTCGCGCGACGGTCTACACCGCGCTGGCGGCCGCCGGGCTGCCCTGGCTGGGTCCGGTCGGCCGGTTGGACAAGGCCAGCGAAGGACTGTTGCTGCTGAGCAACGACACCCGTTGGGCGGCTGCCATCACCGACCCGCTGACGCATCTGGAGAAGACTTATCACGTCCAGGTCGCGGGGCTGCCGGATGCTGCGGTGCTGGCCGCGATGCTGGCGGGCGTCGAGGATGCCGGTGAACGCCTGAAGGCGCGCCGCGTCACGCTGCTGCGTGCGGGCGCAAAGAATGCATGGCTCGAAGTGGTGCTGGACGAAGGCCGCAACCGACATATTCGTCGGCTGCTGGCGGCGCTGGGTTTCGACGTGATGCGGCTGATCCGGGTGGCGATCGGCCCGCTTGCGCTTGGCGAACTGGCGAAGGGCCAGTGGCGCCGGCTGGAAGAGCACGAGGTGCGTTCGCTGGCGGCGAAGCGGCCGTGA
PROTEIN sequence
Length: 258
MSRPSSFHPARATGPTPPSRYGLARVLSKLGVCSRSQAEQWIRAGRVSVGGRVVRDPQHPTLIDRQGIAIDGEAVGRATPVHVAFNKPRGIVVSAADEHGRATVYTALAAAGLPWLGPVGRLDKASEGLLLLSNDTRWAAAITDPLTHLEKTYHVQVAGLPDAAVLAAMLAGVEDAGERLKARRVTLLRAGAKNAWLEVVLDEGRNRHIRRLLAALGFDVMRLIRVAIGPLALGELAKGQWRRLEEHEVRSLAAKRP*