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scnpilot_solids2_trim150_scaffold_5413_4

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(3337..3720)

Top 3 Functional Annotations

Value Algorithm Source
Endoribonuclease L-PSP n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNH5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 89.8
  • Coverage: 127.0
  • Bit_score: 221
  • Evalue 4.50e-55
Endoribonuclease L-PSP {ECO:0000313|EMBL:EIM01017.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 127.0
  • Bit_score: 221
  • Evalue 6.30e-55
endoribonuclease L-PSP similarity KEGG
DB: KEGG
  • Identity: 89.0
  • Coverage: 127.0
  • Bit_score: 220
  • Evalue 3.10e-55

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 384
ATGCCTTTCGACATCATCGCCACCGACCAGGCACCGGCCGCCATCGGCCCGTATTCGCAGGCCGTGCGTGCCGGCAACACCGTCTATTTTTCCGGCCAGATCCCGCTGGACCCGACCACCGGCAGCCTGGTCGACGGCGACATCGGCATGCAGACGCGACGGGTGTTCGACAATCTCGCCGCGGTGGCGCAGGCTGCCGGCGGCTCGCTGGCGCAGATCGTGCGCGTGGGCATCTATGTCACCGACCTGGCCAACTTCGCCGCCGTCAACGCGGTGATGGCCGAATACTTCCAGCAGCCGTATCCGGCGCGCTCGACCATCGAGGTGTCCGCGTTGCCGAAGGCGGCGCAGGTAGAGGTCGATGCGATCATGGTGCTGGACTGA
PROTEIN sequence
Length: 128
MPFDIIATDQAPAAIGPYSQAVRAGNTVYFSGQIPLDPTTGSLVDGDIGMQTRRVFDNLAAVAQAAGGSLAQIVRVGIYVTDLANFAAVNAVMAEYFQQPYPARSTIEVSALPKAAQVEVDAIMVLD*