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scnpilot_solids2_trim150_scaffold_5435_2

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(204..1997)

Top 3 Functional Annotations

Value Algorithm Source
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 597.0
  • Bit_score: 1124
  • Evalue 0.0
Elongation factor 4 n=1 Tax=Rhodanobacter denitrificans RepID=I4WR83_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 597.0
  • Bit_score: 1124
  • Evalue 0.0
GTP-binding protein LepA similarity KEGG
DB: KEGG
  • Identity: 95.6
  • Coverage: 597.0
  • Bit_score: 1124
  • Evalue 0.0

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1794
ATGGAATTGATCCGCAACTTCTCCATCATTGCCCACATCGATCACGGCAAGTCCACGCTGGCCGACCGCATTATCCAGATCTGCGGCGGTCTGGCTGACCGCGAGATGGAAGCACAGGTGCTGGACAACAATCCGATCGAGCGCGAGCGCGGCATCACCATCAAGGCACAGTCGGTGTCGCTGCCCTACACCGCGCGCGACGGCAAGACCTACCAGCTCAACTTCATCGACACCCCCGGCCACGTGGATTTCTCCTACGAGGTGAGCCGTTCGCTGGCCGCGTGCGAGGGTGCGCTGCTGGTGGTCGACGCGGCACAGGGCGTCGAGGCCCAATCCGTGGCCAACTGCTACACCGCGGTGGAGATGGGCCTGGAAGTGGTGCCGGTGCTCAACAAGATCGACCTGCCCACCGCCGACGTCGAGAAGGTCAAGGGCGAGATCGAGGCGGTGATCGGCATCGACGCCACCGACGCGGTGGCGATCAGCGCCAAGACCGGGCTCAACGTGGTCGAGGTGCTGGAGGCAATCGTGGCGCGCATCCCGCCGCCCAAGCCGCGCGACACCGATCGCCTGCAGGCGCTGATCATCGACTCGTGGTTCGACAACTACCTCGGCGTGATCTCGCTGGTGCGCGTCATGCAGGGCGAGATCAAGCCCGGCGACAAGTTGCTGGTGATGTCCACCGGGCGCAGCCACGAGGTCGACGACGTCGGCGTGTTCACGCCCAAGCGCAAGAAGCTGGACAAGCTGTCGGCGGGCGAAGTGGGCTGGATCAACGCCTCGATCAAGGACGTGCACGGCGCGCCGGTGGGCGACACGCTGACCCACGCCGGCAAGCCGGCCGCGGCGCCGCTGCCGGGCTTCCAGACCATGCAGCCGCGCGTGTTCGCCGGCCTGTTCCCGGTGTCGTCGGACGACTTCCCGGCGATGCGCGAGGCGCTGGACAAGCTGCGTTTGAACGACGCCGCGCTGTTCTTCGAGCCGGAGTCCTCCGAGGCGATGGGCTTCGGCTTCCGCTGCGGCTTCCTCGGCATGCTGCACATGGAAATCGTGCAGGAGCGGCTGGAGCGCGAATACGACCTCAACCTGATCACCACCGCACCCACGGTGGTTTACGAGGTGCTGCTCAGCGACGGCTCGATCCTGCAACTGGACAACCCGGCCAAGCTGCCGACCAACTCCAGCCTGATCCAGGAAATCCGCGAGCCGATCATCGTGGCCAACATCCTCACCCCGCCGGACTACATCGGCAGCGTGATCAAGCTGTGCGAGGAAAAGCGCGGCGTGCAGCGTTCGATCCAGTACCTGGCCACCCAGGTGCAGATCAGCTACGAGATGCCGCTGGCCGAGGTGGTGATGGATTTCTTCGACCGGCTGAAGTCCGTTTCGCGCGGCTACGCCTCGATGGATTACCACTTCGACCGTTTCGAGGCCGGTCCGTTCGTGCGCACCGATGTGCTGATCAACGGCGAGCGCGTCGACGCGCTGAGCCTGATCGTGCACCGCAGCCACGCCGACCGCCGCGGCCGCGAACTGGTCGAGCGCATGAAGGAGCTGATTCCGCGCCAGCAATTCGACGTGGCGATCCAGGCCGCGATCGGAGCGCAGATCATCGCCCGCTCGACGGTGAAGGCATTGCGCAAGAACGTGCTGGCCAAGTGCTACGGCGGCGACGTCAGCCGCAAGAAGAAGCTGCTGGAGAAACAGAAGGAAGGCAAAAAACGGATGAAGCAGGTCGGGCGGGTCGAGATCCCCCAGGAAGCCTTCCTCGCCGTGTTGAAAGTGGATAAATAG
PROTEIN sequence
Length: 598
MELIRNFSIIAHIDHGKSTLADRIIQICGGLADREMEAQVLDNNPIERERGITIKAQSVSLPYTARDGKTYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAAQGVEAQSVANCYTAVEMGLEVVPVLNKIDLPTADVEKVKGEIEAVIGIDATDAVAISAKTGLNVVEVLEAIVARIPPPKPRDTDRLQALIIDSWFDNYLGVISLVRVMQGEIKPGDKLLVMSTGRSHEVDDVGVFTPKRKKLDKLSAGEVGWINASIKDVHGAPVGDTLTHAGKPAAAPLPGFQTMQPRVFAGLFPVSSDDFPAMREALDKLRLNDAALFFEPESSEAMGFGFRCGFLGMLHMEIVQERLEREYDLNLITTAPTVVYEVLLSDGSILQLDNPAKLPTNSSLIQEIREPIIVANILTPPDYIGSVIKLCEEKRGVQRSIQYLATQVQISYEMPLAEVVMDFFDRLKSVSRGYASMDYHFDRFEAGPFVRTDVLINGERVDALSLIVHRSHADRRGRELVERMKELIPRQQFDVAIQAAIGAQIIARSTVKALRKNVLAKCYGGDVSRKKKLLEKQKEGKKRMKQVGRVEIPQEAFLAVLKVDK*