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scnpilot_solids2_trim150_scaffold_5503_4

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(3130..5367)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WN83_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 83.5
  • Coverage: 745.0
  • Bit_score: 1318
  • Evalue 0.0
TonB-dependent receptor {ECO:0000313|EMBL:EIM00925.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.5
  • Coverage: 745.0
  • Bit_score: 1318
  • Evalue 0.0
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 83.4
  • Coverage: 745.0
  • Bit_score: 1314
  • Evalue 0.0

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2238
AACCAGATGTCCGAACTCAACGGACACAAGTTCTCGGCCGCCTACAGCAACACCTTCGCCAACGACACCGTCGGCGTGCTGCTGGGCGTGGTCAAGGCCAAGCGCAAGGATCGCACCGACGTCGCCGGCAACGACGGCGGCTGGACGCGCAACCCCGACCCCAACGATCCCAACTGGTACGGCAACGCCTGGGGCGGCAACATCGACCTCAACGGCAACGGCGAACTGGACCCGGAAGATTACGGATTGATCGCCCCCGGCCAGTTCCGGGTCGGCTCGATCCTGGAGGACAAGAAGCGCAGCGCCTATTCCGGCAAGATCGAGTGGCGTCCGAACGACCGGGTGCGCATCGTGGTGGATGGGTTGAAGACGCGCCTGGATTCGCCGCAGGTGTCCTTCCAGCAGTCCTACTACCCGCTGTTCGCGCCGGGGCGCTGGTCCGACATCACCGTGCAGAACGGCATCGTCACCGGTTTCACCATGGACAACCCGGACCCGGAGCTGCGGCTCAATCCGGAACTGCTGAACCAGACCCAGTACCGCGTCGTCGATACCGCGCTGTACGGCATCAACGGCGAGTGGAAGGCCACCGACGACCTGACCCTGACCGGCGACCTGTACCGCTCCACCTCGGAGCGTCGCTCCGGCGGCCAGGACACCTACGTCGTGCTGCGCATGAACCAGCCCAACACGGCGCGCATCACCGTCGGCCCGTACGCGGTGCCCAACGTCGACGTGAAGTTCGACGACGGTCGCGACCTGATCTCCGGCCTCGCCAGCGGCCAGTTCAGCGATTCGGACTTCAACACGCACTACATGGAGTTGAGCGGCGACAACATCCGTGACGAGATCACCGGCGGCACCGTGGCCGGCAAGCTGTTCGTCGGCAAGTGGGGCGTGGACAACCTGCGCTTCGGCGTGACCCGCACCGAGCGCGAGAAGTCGCGCGACCTGGTCAACAACACCCTCAACGGCGGCGCGGACTACTACTCCGAGGACAACGCCATCAACGTGGCCGACCTCGGCGGCAACGTGATCTCGCACTCCTTCCACCTGCCGCACTTCATGTCCGGCGTGGGCAGCAGCTTCCCGCGCAGCTTCCTGGCCTTCGACGTGCCCAATTACCTGGCCCGGCTGCAGGCCTACAACGGCAACCTCCGCCCGGACGGCACGCCGTACGACTACGCGCTGGCCGGCCCGCAATGGAACCCGCTGCAGAGCTACCGCGTCAGCGAGAAGACCAACGCGTTCTACGTGCAGGCGGACATGTCCGGGGATCGCTGGGAAGGCGACGTCGGCGTGCGCCTGGTGCAGACCGATACCCGCGCCCAGGCCTGGGACGCCAAGATCCTGAGCATCACCGAGAACGGGCCTTTCAACTACACCGCCCAATACGACGCGCCGACGCCGGTCGTCCAGGACGCCCATTACAGCTATCTGCTGCCCTCGGCCAACTTCACCTGGCATTTCACCGATCAGTTGCAGTTGCGCGCCGGCGCGGCCAAGACCATGGCGCGTCCGGCAGTGAACCAGCTGGCGCCGACCAACACCACCGAAAGCGTGTCGTGGGGCGAGTTCACCCAGGTCTACGGCGGCAACGCGGACCTCAAGCCCTACAGTGCGGCTCAGGGCGACCTGTCGCTGGAGTGGTATTTCGCCGAGCACTCCGTCGCCAGCCTGGCGGTGTTCTACAAGCGCATCACCAACCAGATCACCACCAGTTGGGAAACCGGCCAGGACATCGGCGTGCCGGGTTACCTGTTCAACATCATGCGTCCGATCAATGGCGACCACGCCAGGGTGAAGGGCATGGAGATGAGCCTGCAGCACTTCTGGAACAACGGTTTCGGCGTGCGTGCGCAGTACACGCGCAACCTGTCCACGAGCTGGGTGGACGGCGAGCAGCGGCCGCTTGAAGGCATCGCCCCGGCGACCTATTCGCTGGGCGTGATGTACGAGAAGGGCAAGTGGTCGGTGGGCGCCAACGCCGACCGCACCAACGGCTTCGTCACCGCGATCAACGTGCTGGGTACCGGCTACAACGAGCAGGCCGACGCGATCACCTGGGTCACCGCGCACGTCTCCTACAAGTTCAACGACATGATCAGCGTCAGCCTGGACGGCCAGAACCTGCTGGACAAGGCGCAGACCTACAGCATCAACGGCAACCCGCTGCTGTCGCAGGGCTATTACCGCTATGGCCGTTCCGTCAACCTGGGGGTGGCGCTGCGCTTCTAG
PROTEIN sequence
Length: 746
NQMSELNGHKFSAAYSNTFANDTVGVLLGVVKAKRKDRTDVAGNDGGWTRNPDPNDPNWYGNAWGGNIDLNGNGELDPEDYGLIAPGQFRVGSILEDKKRSAYSGKIEWRPNDRVRIVVDGLKTRLDSPQVSFQQSYYPLFAPGRWSDITVQNGIVTGFTMDNPDPELRLNPELLNQTQYRVVDTALYGINGEWKATDDLTLTGDLYRSTSERRSGGQDTYVVLRMNQPNTARITVGPYAVPNVDVKFDDGRDLISGLASGQFSDSDFNTHYMELSGDNIRDEITGGTVAGKLFVGKWGVDNLRFGVTRTEREKSRDLVNNTLNGGADYYSEDNAINVADLGGNVISHSFHLPHFMSGVGSSFPRSFLAFDVPNYLARLQAYNGNLRPDGTPYDYALAGPQWNPLQSYRVSEKTNAFYVQADMSGDRWEGDVGVRLVQTDTRAQAWDAKILSITENGPFNYTAQYDAPTPVVQDAHYSYLLPSANFTWHFTDQLQLRAGAAKTMARPAVNQLAPTNTTESVSWGEFTQVYGGNADLKPYSAAQGDLSLEWYFAEHSVASLAVFYKRITNQITTSWETGQDIGVPGYLFNIMRPINGDHARVKGMEMSLQHFWNNGFGVRAQYTRNLSTSWVDGEQRPLEGIAPATYSLGVMYEKGKWSVGANADRTNGFVTAINVLGTGYNEQADAITWVTAHVSYKFNDMISVSLDGQNLLDKAQTYSINGNPLLSQGYYRYGRSVNLGVALRF*