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scnpilot_solids2_trim150_scaffold_3423_6

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(5819..6031)

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2W9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 70.0
  • Bit_score: 128
  • Evalue 2.20e-27
XRE family transcriptional regulator {ECO:0000313|EMBL:EIL93810.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 70.0
  • Bit_score: 128
  • Evalue 3.10e-27
XRE family transcriptional regulator; K07729 putative transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 82.1
  • Coverage: 67.0
  • Bit_score: 118
  • Evalue 9.30e-25

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 213
ATGAGCGGCACGCCGATCGACAACAGCATCCGCAAGCTGCGCTTCGAGCATGGCGAAATGACCCAGCAGGCGCTGGCCGATGCCTGCGGGATCACGCGGCAGACGGTGATCGCGCTGGAAGGCGGCAAATACGCGCCGTCGCTGGAGCTGGCCTTCCGTATTGCCCATGCGTTCGGCGTGGGGGTGGAGGACGTGTTCCGCTGGCGACGCTGA
PROTEIN sequence
Length: 71
MSGTPIDNSIRKLRFEHGEMTQQALADACGITRQTVIALEGGKYAPSLELAFRIAHAFGVGVEDVFRWRR*