ggKbase home page

scnpilot_solids2_trim150_scaffold_3006_5

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: 5695..7596

Top 3 Functional Annotations

Value Algorithm Source
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 633.0
  • Bit_score: 1294
  • Evalue 0.0
threonyl-tRNA synthetase (EC:6.1.1.3) similarity KEGG
DB: KEGG
  • Identity: 90.7
  • Coverage: 633.0
  • Bit_score: 1193
  • Evalue 0.0
  • rbh
Threonine--tRNA ligase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5D0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 633.0
  • Bit_score: 1294
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1902
ATGATCGAGATCACGCTACCCGACGGCAGCAAGCGGCCGTTCGACCATCCCGTCACCGTGCAGGACGTGGCCGCCTCGATTGGCGCCGGCCTGGCCAAGGCGACCCTGGCCGGCAAGGTCGACGGCAAGCTGGTCGATGCCAGCTTCCCGATCGAACACGACGCCAGCCTGCAGATCATCACCGAGAAAAGTCCCGAGGCGCTGGAGATCCTGCGCCATTCGACCGCCCACCTGATGGGGCAGGCGGTGCAGCGGCTGTTCCCGGGCGCGCAGGTCACCATCGGTCCGGTGATCGACAACGGCTTCTACTACGACTTCGCCTACGAGCGCCCGTTCACCCCGGACGACCTGCCGAAGATCGAGGCGGAGATGCACAAGCTCGTCGCCGAGCAGTTGCCGGTGACCCGCAGCGTGAAGTCACGCGACGAGGCGGTGGCGTTCTTCCGCGGCCTGGGTGAGAACTACAAGGCCGAGATCATCGAAGGCATTCCGGCCGACCAGGACCTGTCGCTGTATTCACAGGGCGAGTTCACCGACCTCTGCCGCGGCCCGCACGTGCCGAACACCGGCAAGCTGCACTCGTTCAAGCTGATGAAGGTGGCCGGCGCGTACTGGCGTGGCGATTCCAGCAACGCGATGCTCAGCCGCATCTACGGCACCGCCTGGCTCAACGACAAGGATCTGAAGGCCTACCTGTTCCAGCTGGAAGAAGCCGAGAAGCGCGACCATCGCAAGATCGGCAAGCAGCTCGACCTGTTCCACCAGCAGGAGGAAAGCCCCGGCATGGTGTTCTGGCACCCGAACGGCTGGGCGATCTGGCAGCAGGTCGAGCAGTACATGCGCGGCGTGTACAAGAAGAGCGGCTACCAGGAGGTGCGTTGCCCGATGGTGCTGGACGTGTCGCTGTGGAAGCGCTCGGGCCATTGGGACAACTACGCCGAGAACATGTTCTTCACCGAGTCGGAGAAGCACACCTTCGCGCTGAAGCCGATGAACTGCCCCGGCCACGTGCAGGTGTTCAACACCGGCCTGCACAGCTACCGCGAGCTGCCGATCCGCTACGGCGAGTTTGGCGGCTGCCATCGCAACGAGCCGTCCGGCGCGCTGCACGGCATCATGCGCGTGCGCGCGTTCACCCAGGACGACGGCCACATCTTCTGCACGCCCGAGCAGGTCGAGGCGGAGGTCACCGCGTTCCATCTGCAGGCAATGAAGGTCTATGCCGACTTCGGCTTCACCGACCTGGCGATCAAGCTGGCGCTGCGCCCCGAAAAGCGAATCGGCTCGGACGAATTCTGGGATCGCACCGAGGAAATGCTGCGCAATGCGCTGCGTGCCGCGGGCGTGGCGTGGGAGGAGCTGCCGGGTGAGGGTGCGTTCTACGCGCCAAAGATCGAGTACCACCTGAAGGACTCGATCGGTCGCGCCTGGCAGGTCGGCACCATGCAGGTCGATTTCATGATGCCGGAGCGGCTGGACGCCGAATACGTCGACGAACACTCGCACAAGCGGCATCCGGTGATGCTGCACCGGGCCATCGTGGGTTCGATGGAGCGCTTCATCGGCATCCTGATCGAGCACCACGCCGGTCTGCTGCCGGCCTGGCTGGCGCCGGTGCAGGCGGTGGTGTTCAATATCACCGACGCGCAGGCCGATTATGTCCGCGAAGTCACGCAAACCCTTGTCGACAAAGGTTTCCGGGTACAATCGGATTTGCGCAACGAGAAAGTCGGCTATAAAATCCGCGAACATACGATGCAGAAAGTGCCGTACCTGCTCGTGGTCGGTGACCGCGAGAAAGAAACGGGGTCGGTTTCTGTGCGTACCCGTTCCGGTGAGGACCTGGGCAGCATGAAGCTGGCCGATTTCATCGAGCGACTGGAGACCGAAACCCGGCGCTGA
PROTEIN sequence
Length: 634
MIEITLPDGSKRPFDHPVTVQDVAASIGAGLAKATLAGKVDGKLVDASFPIEHDASLQIITEKSPEALEILRHSTAHLMGQAVQRLFPGAQVTIGPVIDNGFYYDFAYERPFTPDDLPKIEAEMHKLVAEQLPVTRSVKSRDEAVAFFRGLGENYKAEIIEGIPADQDLSLYSQGEFTDLCRGPHVPNTGKLHSFKLMKVAGAYWRGDSSNAMLSRIYGTAWLNDKDLKAYLFQLEEAEKRDHRKIGKQLDLFHQQEESPGMVFWHPNGWAIWQQVEQYMRGVYKKSGYQEVRCPMVLDVSLWKRSGHWDNYAENMFFTESEKHTFALKPMNCPGHVQVFNTGLHSYRELPIRYGEFGGCHRNEPSGALHGIMRVRAFTQDDGHIFCTPEQVEAEVTAFHLQAMKVYADFGFTDLAIKLALRPEKRIGSDEFWDRTEEMLRNALRAAGVAWEELPGEGAFYAPKIEYHLKDSIGRAWQVGTMQVDFMMPERLDAEYVDEHSHKRHPVMLHRAIVGSMERFIGILIEHHAGLLPAWLAPVQAVVFNITDAQADYVREVTQTLVDKGFRVQSDLRNEKVGYKIREHTMQKVPYLLVVGDREKETGSVSVRTRSGEDLGSMKLADFIERLETETRR*