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scnpilot_solids2_trim150_scaffold_3107_5

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(3342..6182)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-associated protein RapA {ECO:0000256|HAMAP-Rule:MF_01821, ECO:0000256|SAAS:SAAS00010031}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01821, ECO:0000256|SAAS:SAAS00010033};; ATP-dependent helicase HepA {ECO:0000256|HAMAP-Rule:MF_01821}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 946.0
  • Bit_score: 1695
  • Evalue 0.0
RNA polymerase-associated protein RapA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WM34_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 91.3
  • Coverage: 946.0
  • Bit_score: 1695
  • Evalue 0.0
DNA/RNA helicase, superfamily II, SNF2 family similarity KEGG
DB: KEGG
  • Identity: 90.7
  • Coverage: 946.0
  • Bit_score: 1681
  • Evalue 0.0

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2841
ATGTTCGTACCCGGTCAACGCTGGATCTCCTCCGCCGAACCCGAGCTTGGCCTCGGCACCGTGCTGCGCGTCGAAGGACGCGGCGTGCAGGTGCTGTTCGCCAAGGCCGGAGTGCTGCGCCCTTACGCGATCGACTCGGCGCCGCTGCTGCGCGCCGAGTTCCGCGCCGGCCAGCGCGTCGCCGGCAAGGGCATCGCGTTCCTGGTCGAGCGCGTCGAGATCAAGGACGAGCTGCTGATCTACCGCGGCGAAGGCCGCGAACTGCACGAAGGCCAGCTCGACGACGAACAGAGCGTGAGCCAGGCCGACGACCGCCTGATCGGTGGGCGCACCGACAGCGTGGCGCAGTTCGAGCTGCGCCTGGAGGGTCTGAAGCGGCGCGCCGAGGCGCGCCGTTCGCCGATGTGGGGTCTGGGTGCCGCGCGCATCGGACTGGTGCCGCACCAACTGCGCGTGGCCGGCATCGCCTCGGCACGCCGCCCGCCGCGCGTGCTGCTGGCCGACGAAGTGGGACTGGGCAAGACCATCGAGGCGGGCATGATCGTCGCGCGCCAGCTCGCCACCGGCCGCGCCTCGCGCGTGCTGCTGCTGTTGCCCGACACGCTGGTCTACCAGTGGTTCGTCGAGATGCTGCGCCGCTTCAACCTCAGCTTCGCGATCTACGACGAGGAACGCTGCGAGGCCCTGGAGCAATCCGGCGATGTCGGCAACCCGTTCGAGGACGAGCAACTGGTGATCGCCGACTTCGGCTTCCTGGAAAGCTCGCCGAAGTACGCGCGGCAACTGCTGGACGCGCCGTGGGATCTGCTGGTGGTGGACGAAGCGCATCACCTGGCCTGGTCGCCGGAAGCCGCCAGCCCACGCTACACGATGGTGGAGCAACTGGCCGCGGCGATCCCCGGCGTCATCCTTCTCACCGCCACCCCGGAACAGCTCGGACGCAGCGGCCACTTCGCCCGCCTGCGCCTGCTCGATCCGCAGCGCTATCACGATCTGGACGGCTATCTGGCCGAGGCCGACACCTATCAGGCGCTATCGAAGATCGCCGACCGCCTGCTCGACGGCCAGCCGTTGGATGCCGGCCAGCACGCCGCGCTCACCGAGGCCTTCCACGGCGATGCGACGCTCACCGCACTGCTGGCCGATTCCACCAGGCCGGCCCATGCGCGCGAACTGCTGGCCGCGCTGATCGACCGCCATGGCACCGGTCGCGTGATGTTCCGCAATAACCGCGCCGGCGTCGGCGGCTTTCCCAAACGCCTGCCCGAATGGCACCTGCTGGACGCCGACACGGTCGACGACAGCACACGGCAGGCGCTGCTGGCCGAGTTCCACGCCGACATCCAGCAGCCGCCGGCGCTGATCGAGGTCGACTACGCCACCGACCCGCGCATCGATACCCTGATCGCCCTGCTGGAGAAACATCCGCAGGACAAGTTCCTGCTGATCTGCCGCAGCCAGGCCAAGGTGCTGGCGCTGGAAGAAGCGCTGCGCACGAAGAGCGGCGTCGGCGTGGCGCGTTTCCACGAAGGTCTCAGCATCGTGCAGCGCGACCGCAACGCCGCCTATTTCGCCCAGCCCGACGGCGCGCGTTTGCTGCTGTGCTCGGAGATCGGTTCGGAAGGCCGCAACTTCCAGTTTGCGCACCGGCTGGTGCTGTGGGATCTGCCGCTGGATCCGGACCTGCTCGAACAGCGCATCGGTCGGCTCGACCGCATCGGCCAGAAGCACGACATCGCCATCCACATCCTCGCCGTGGCCGACAGCGCCCAGCACGTGCTGGCGCGCTGGTACGACGAAGGCGTCGACGCGTTCCGCCTCAGCCCGGCCGACGGCCGCGAACTGCTGCGCCGCTACGGCGAGCCGCTGACCCGCCTGGCGGACGAGCACGCCCGCGGCGACGACAACCGCGATCAGGAACTCGACGCCCTGCTCGCCGAAACCCGCGCCAGCCACGAGCAGATGGCGGCACTCATCCGCGGCGGCCGCGACCACCTGCTGGAACTCGCTTCCAGCCGCGACCCGCACGCCGACGAATTGCAGCAGGCCTTCCGCCGCGACGATCATGATCCGGGCCGCGACGCCTTCGTGCAGCGCCTGCTGGAGGCATTCGGCATCCACGCCGAGGAGCTCGGCGCGCAAGTGCTGCTGCTCGACCCGCAATACCTGTCCACCGACGCCCTGCCCGGCTTCGCCGAAGGCCCGCAGTCGGTCACGTTCTCGCGCGAAGTGGCGCTGTCGCGCGAGGAGCTGCCGCTGCTGCGGCTGGACCTCCCGCTGGTAGCCGGTGCGCTGGATCTGGCGCTGTCCGGCGAACAGGGCAATGCCGCCTTCATGGTCGACGACGTGCTGGCTCCGCGGACCGCACTGCTGCAGGCGGTTTACGTGCTCGAATGCGTGGCCGATCGCCGGCTCGACGCCGAGCGTTTCCTGCCGCCCTCGCCGCTGGTGGTGACCGTGGACACCCGCCTGGTCGAACGCGCCGACTTCACGCCCAGCGACACGGCGCTGCGCAAGGCCAACGACCGCCACATCGAGGTGGCACGCTACCGCAAGTTCCTCGGCAAGCTGGTGCCGCCGATGCTGGAACGCGCCGAAGCGCTGGCCAGTACGCGCGCGCAAGCGCACATCGACGACGCCGTGGCCGCCGCCACCGAATCGCTGGACAACGAACTCTCGCGGCTGCTCGCCCTGCGCACAGTGAACCCATCGATCAGCGACACCGAAATCGCCGCCGTCACCGACGAGCGCCACGCCCTGCTCGGTGCACTGCCGCAAGCGCGGCTGCGACTGGACGCCGTGCGTTTCGTCGTCAGCGCCGACTTCCTCGCCCTGCGCTGA
PROTEIN sequence
Length: 947
MFVPGQRWISSAEPELGLGTVLRVEGRGVQVLFAKAGVLRPYAIDSAPLLRAEFRAGQRVAGKGIAFLVERVEIKDELLIYRGEGRELHEGQLDDEQSVSQADDRLIGGRTDSVAQFELRLEGLKRRAEARRSPMWGLGAARIGLVPHQLRVAGIASARRPPRVLLADEVGLGKTIEAGMIVARQLATGRASRVLLLLPDTLVYQWFVEMLRRFNLSFAIYDEERCEALEQSGDVGNPFEDEQLVIADFGFLESSPKYARQLLDAPWDLLVVDEAHHLAWSPEAASPRYTMVEQLAAAIPGVILLTATPEQLGRSGHFARLRLLDPQRYHDLDGYLAEADTYQALSKIADRLLDGQPLDAGQHAALTEAFHGDATLTALLADSTRPAHARELLAALIDRHGTGRVMFRNNRAGVGGFPKRLPEWHLLDADTVDDSTRQALLAEFHADIQQPPALIEVDYATDPRIDTLIALLEKHPQDKFLLICRSQAKVLALEEALRTKSGVGVARFHEGLSIVQRDRNAAYFAQPDGARLLLCSEIGSEGRNFQFAHRLVLWDLPLDPDLLEQRIGRLDRIGQKHDIAIHILAVADSAQHVLARWYDEGVDAFRLSPADGRELLRRYGEPLTRLADEHARGDDNRDQELDALLAETRASHEQMAALIRGGRDHLLELASSRDPHADELQQAFRRDDHDPGRDAFVQRLLEAFGIHAEELGAQVLLLDPQYLSTDALPGFAEGPQSVTFSREVALSREELPLLRLDLPLVAGALDLALSGEQGNAAFMVDDVLAPRTALLQAVYVLECVADRRLDAERFLPPSPLVVTVDTRLVERADFTPSDTALRKANDRHIEVARYRKFLGKLVPPMLERAEALASTRAQAHIDDAVAAATESLDNELSRLLALRTVNPSISDTEIAAVTDERHALLGALPQARLRLDAVRFVVSADFLALR*