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scnpilot_solids2_trim150_scaffold_4742_2

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(1434..2678)

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter, MFP subunit n=1 Tax=Rhodanobacter denitrificans RepID=M4NCU4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 415.0
  • Bit_score: 766
  • Evalue 1.60e-218
  • rbh
RND family efflux transporter, MFP subunit similarity KEGG
DB: KEGG
  • Identity: 93.5
  • Coverage: 415.0
  • Bit_score: 766
  • Evalue 5.00e-219
  • rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 415.0
  • Bit_score: 785
  • Evalue 3.50e-224

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Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1245
ATGAAAAAACAATGGATGCTGGTCCCCCTGATCGCTGCCGGCGTGCTCGGCAGCTGGGTTCTCCTGCACGGCAACGACAGCCATGCGCAAAGCCCCGCCGGCGGGCCGCCGCCGGAAGTGACCGTGGCGCAGGCGCTGACCCGCAAGGTCAGCGACAGCGCCGAGTTCACCGGCCGGCTGGAAGCGGTCAACACGGTGCAGGTGCAGCCGCGGGTCGGCGGCTTCGTCGAATCGGTGCATTTCCAGGAAGGCGCGCTGGTGCACAAGGGCGACGTGCTGTTCCAGCTCGACGCCCGCCCGTACCAGGCCGAAGTCGACCGGCTGGTCGCCAACCAGGCGCAGGCCAGGGCCGAGCTGAGCCTGGCCGAGACCAACCAGCGCCGCGCCGAGATGCTGCTGGCCCAGCACGCGATCGCGCAGCAGGAAGCCGACCGCCAGGCCACCACCGCGCAGAGCGCGCGGGCGCAGCTCGGTGCGGCCACCGCCGCGCTGGCCGCGGCGCGGCTGAACCTGGACTTCACCCGGGTGCGTTCGCCGATCGACGGCCGCGTCAGCAACGCCCGCGTCACCCCCGGCAATCTGGTCACCAGCAACGACGTGCTGACCAGCGTGGTCTCGGTCAACCCGGTCTATGTCTATTTCGACGTGGACGAGCAGACCTGGCTCAAGCTCGACCACCTGCGCGCCGACGCGAAGCAGGCCGGCCGCAACGCGCGGATCGAGGCCGCGATGGGCCTGGCCGACGAGACGGGCTACCCGCATGAAGGCCGCCTCGACTTCGTCGACAACCAGTTGCACACCGGCTCCGGCACGATGCGCCTGCGCGCGGTGTTCGACAACGCCGACGGCCTGTACACGCCCGGCCTGTACGCCCGCGTGCAGCTGCAGAGCGGTCAGGCCCGCCCGCGCGTGCTGGTCGACGACCGCGCGATCGGCACCGACCTCGGCAATCAGTTCGTCTACGTGGTCGACAAGGACCACAAGGTGCAATACCGCAAGGTCGACACCGGTGCCTTGTTCCACGGCCTGCGCGTGATCGACAGCGGCCTGGCGCCGACCGACCTGGTGGTGGTGAACGGCCTGCAGCGCGTGCGCCCCGGGGTCGAGGTGAATCCGCAGAAGGTGGCCATGAGCTACCGGCTGGATGCGACCGACAAGGCGCTGGTCGAGCGCGGCGATGCACCGAACGCCGATTCGCGCACCGCGCAGGCCAACACGGCGAGCCCAAAGACCCCGCAAGGCTGA
PROTEIN sequence
Length: 415
MKKQWMLVPLIAAGVLGSWVLLHGNDSHAQSPAGGPPPEVTVAQALTRKVSDSAEFTGRLEAVNTVQVQPRVGGFVESVHFQEGALVHKGDVLFQLDARPYQAEVDRLVANQAQARAELSLAETNQRRAEMLLAQHAIAQQEADRQATTAQSARAQLGAATAALAAARLNLDFTRVRSPIDGRVSNARVTPGNLVTSNDVLTSVVSVNPVYVYFDVDEQTWLKLDHLRADAKQAGRNARIEAAMGLADETGYPHEGRLDFVDNQLHTGSGTMRLRAVFDNADGLYTPGLYARVQLQSGQARPRVLVDDRAIGTDLGNQFVYVVDKDHKVQYRKVDTGALFHGLRVIDSGLAPTDLVVVNGLQRVRPGVEVNPQKVAMSYRLDATDKALVERGDAPNADSRTAQANTASPKTPQG*