ggKbase home page

scnpilot_solids2_trim150_scaffold_2990_1

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: 2..1231

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase III subunits gamma and tau {ECO:0000313|EMBL:EIL95049.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EIL95049.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 405.0
  • Bit_score: 613
  • Evalue 2.40e-172
DNA polymerase III subunits gamma and tau n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6F8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 81.0
  • Coverage: 405.0
  • Bit_score: 613
  • Evalue 1.70e-172
DNA polymerase III, subunit gamma/tau similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 415.0
  • Bit_score: 600
  • Evalue 3.60e-169

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1230
CTGCTCGCCACCACCGACCCGCAGAAGCTGCCGGTGACGGTGCTGTCGCGCTGCCTGAAGTTCAACCTGAAGCGGCTGCTGCCGGAGCAGATCTCCGGCCAGATGCGGCACATCCTGGGTGCCGAGAACATCGCCTATGAAGACAGCGCGATCGGCGAGCTGGCCCGCGCCGCGGACGGCTCGCTGCGCGATGGCCTGTCGCTGCTTGACCAGGCCATCGCCTATGGCGGCGGCGCGCTGCACGCCGACGACGTGCGCACCATGCTGGGCAGCGTGGCGCGCGGGCAGGTGCTCGGCGTACTGGAGGCGCTGGCTTCGGGCGACGGCGAGCAGCTGCTGGTCGAGTGCACGCAGATCGCCTCCTATTCGCCCGACTTCGGCGGCGTGCTCGACGACATCGCCGGCCTGCTGCATCGCCTGCAGCTGATCCAGCTGATTCCCGGCTACCGGCCGGAAGCGGATGACGCCGACGGCGCGCTGGCCGACCTCGCCGGGCGCATCACGCCGGAGGACGTGCAGCTGTACTACCAGATTGCAGTGACGGGCCGGCGCGACCTCACGCTGGCGCCCGACGCCCGCACCGGTTTCGAGATGGCCTTGCTGCGCATGCTCGCTTTCCGTCCGGGCGACGAACCCGCGGCGGCGCGCGTGGCGCCGCGTGCGCCGACGAGCCAGGCGCACGCGCGTGCACCCGCACCGCCGTCCGCAGATGCTCGCGCTGCCACGCCGACACCCGCGCCAGCACCGCGCGAGCCAGCCGCGCAGGCTCCGGCGCCCGCGCCGATCGCACGCGATGCGAGCGGCCGGCCGGATTGGGAGGCGCTGATCGAACGGGCCCAGCTGCGCGGGCCGTTCAGCGTGGTGGCGCAGAACGCGGTGCTGCGCGAGCGTGACGGCCAGACCCTGGTGCTGGCGTTGCAGCCGGCGCACATGGGCATGGCGGTGGAGCCCATGGTCAGCCAGATGGAGGATCGCATCAGCCAGGCGCTGGGCGAGACCATCCGCCTGCGCTTCGTCAGCGAGAGCCAGGCCGACGCCATGCAGACCCCGGCGGCGCGCGCGGCCAAGGCACGCGACAGCGCGCAGAGCGCGGCCGAGCAGGCGATCGAGGACGATCCGCTGGTGCAGAGCCTGAAGCGCGACTTCGGCGCCCGCGTCGTGCCGCAATCCGTCAAACCCTTGGGCAACGAACCCGGAGCCAGACAGCGTGGTGATGACCGGCGCGCATGA
PROTEIN sequence
Length: 410
LLATTDPQKLPVTVLSRCLKFNLKRLLPEQISGQMRHILGAENIAYEDSAIGELARAADGSLRDGLSLLDQAIAYGGGALHADDVRTMLGSVARGQVLGVLEALASGDGEQLLVECTQIASYSPDFGGVLDDIAGLLHRLQLIQLIPGYRPEADDADGALADLAGRITPEDVQLYYQIAVTGRRDLTLAPDARTGFEMALLRMLAFRPGDEPAAARVAPRAPTSQAHARAPAPPSADARAATPTPAPAPREPAAQAPAPAPIARDASGRPDWEALIERAQLRGPFSVVAQNAVLRERDGQTLVLALQPAHMGMAVEPMVSQMEDRISQALGETIRLRFVSESQADAMQTPAARAAKARDSAQSAAEQAIEDDPLVQSLKRDFGARVVPQSVKPLGNEPGARQRGDDRRA*