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scnpilot_solids2_trim150_scaffold_9541_1

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: 2..121

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 39.0
  • Bit_score: 81
  • Evalue 9.30e-14
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanoba similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 39.0
  • Bit_score: 81
  • Evalue 4.10e-13
DNA-directed RNA polymerase subunit omega n=3 Tax=Rhodanobacter RepID=I4WVX7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 39.0
  • Bit_score: 81
  • Evalue 3.00e-13

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 120
ATCGACCAGGCCACGATCGACCAGATCGACAAGGCCGAGCGCGAGCGCGCCGAGCGCGAAGCGCTGGAGTGGGCCGCCGCGGAAGTCGACGACGACCTTTCCAAGGGCGGCGACGACTGA
PROTEIN sequence
Length: 40
IDQATIDQIDKAERERAEREALEWAAAEVDDDLSKGGDD*