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scnpilot_solids2_trim150_scaffold_3822_8

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(5925..6185)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-binding transcription factor DksA n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNP5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 60.0
  • Bit_score: 122
  • Evalue 1.90e-25
RNA polymerase-binding protein DksA similarity KEGG
DB: KEGG
  • Identity: 98.3
  • Coverage: 60.0
  • Bit_score: 122
  • Evalue 7.90e-26
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 60.0
  • Bit_score: 122
  • Evalue 2.70e-25

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 261
GTGAATGGCGCGACCAGCTGGTGGAAGAGTCGCGCCAGACCATGGACAACCTGCGCGAGGAAGTGCGGGACGTCGGCCTATCGCAAGCTGATCTCCAAGATCGACAAGGCGCTGCGCCGGATCGAGGAAGGCAGCTACGGCTTCTGCGAGGAGACCGACGAGGAGATCGGCGTCGACCGCCTCGACGCGCGCCCGATCGCCACGCTCTCGCTCGACGCCCAGGAACGCCGCGAACATCTGCAGAAGCAGATGGGGGACTGA
PROTEIN sequence
Length: 87
VNGATSWWKSRARPWTTCARKCGTSAYRKLISKIDKALRRIEEGSYGFCEETDEEIGVDRLDARPIATLSLDAQERREHLQKQMGD*