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scnpilot_solids2_trim150_scaffold_3856_9

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(6638..8038)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.6
  • Coverage: 513.0
  • Bit_score: 764
  • Evalue 7.30e-218
pseudouridine synthase family protein (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 77.5
  • Coverage: 506.0
  • Bit_score: 757
  • Evalue 3.40e-216
Pseudouridine synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW74_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 77.6
  • Coverage: 513.0
  • Bit_score: 764
  • Evalue 5.20e-218

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1401
ATGACTGCGCCGCAAAAATCCGTTCTTACCCTGAAGCGCGACACCCGCGCAGCCACTGACGGACCGGCCCTGGAGGAACGCCTGCACAAGGTGCTCGCCAACGCCGGCCTCGGCTCGCGCCGCATGCTGGAACAACGCATCCAGGCCGGAGAGATAGAGCTCAACGGCAGCCCCGCCGAGATCGGCATGAGCGTCAAGGCTGGCGATCGCGTGGTCATGGACGGCAAGCAGTTCGTGGTGGCCACCGACAACCGCGATGACGCCGAAGTGCTGATCTACCACAAGCCCGAAGGCGTGCTGACCACCCGCGACGATCCCGATGGCCGCCCGACCGTGTTCGAGCAACTGCCGCAACTCAAAGGCGCGCGCTGGGTTGCCGTGGGCCGGCTGGACATCAACACCACCGGCCTGCTGCTGCTGACCACCGACGGCGAGCTGGCCAACGGCTTGATGCATCCCAAGAGCGGCATGGAGCGCGAGTACCTGTGCCGCGTGCACGGCGAGGTGCCGGACGAGGTCATCGAACGCCTGAAAGCCGGCGTGGAGCTGGAGGACGGCCCGGCCCGCTTCGACGAGATCGCCGTGATCAGCCGCGGCGGCAGCCACAGCTGGTTCCGCGTGGTGATCCGCGAAGGCCGCAACCGCGAAGTGCGCCGCTTGTGGGATTCGCAGGGCTTCCTGGTCAGCCGGCTCAAGCGCATCCGCTACGGCCGGATCGAGCTGCCGCGCAACCTGCGTCGCGGCGAATGCGAGGCGCTCGACGCCGACAGCGTCAAGCAGTTGCGCCAGACCAGCGGGCTCGGACTCCCCCAGCCGGTGCTGACGCTGAGCCCGATCCTGCACCAGCGCCGTGCCACCCGCGGTGTCACCGAATATCGCCCGGAGCACGGCACCGGCAGCGCCTGGACCAGCGGCCAGGACGAGGCGCGCGAGCTGCGTGCCTACGACCGCATTCGCGAAGAACCCGCACGCGGACGCAAATCCGCGCCGCGCAACGGCCGCGAGGTCAACGGCAACGTGGCGGCACCTGAGCGGGCGCCGGGGAATGCGAAGCGGCACGGCAAGGGCCGTCGTGTGGCACCGGGCCAGGAGCTGCCTTCGGTGCGCACCTGGTTTGCCGGCGAGTCTCGCGATGGCAGCCCCCGTCCCGGCGGTCGGCGCGGCTTGGCCGGCGCCACCACCGGCAACCGTGGCGCGGCGGGTGGCCGCTCACGCGGCGCCCCCGCTGCCGGCAGCCCCTACGCCGGCACGGGCGGCAGCGGCAACCGCGCGCCTGCCAACCGACCCGGCCACGCCGGTCGTGGCCAGGGCGGCAACCGCGCCCCGGGCAGCCCGCGGCCCAAGGGCCATGGCGGCGGACGCCCGCCGGGTCGCGGCGGCAACCGCTCCGGCAACCGTTGA
PROTEIN sequence
Length: 467
MTAPQKSVLTLKRDTRAATDGPALEERLHKVLANAGLGSRRMLEQRIQAGEIELNGSPAEIGMSVKAGDRVVMDGKQFVVATDNRDDAEVLIYHKPEGVLTTRDDPDGRPTVFEQLPQLKGARWVAVGRLDINTTGLLLLTTDGELANGLMHPKSGMEREYLCRVHGEVPDEVIERLKAGVELEDGPARFDEIAVISRGGSHSWFRVVIREGRNREVRRLWDSQGFLVSRLKRIRYGRIELPRNLRRGECEALDADSVKQLRQTSGLGLPQPVLTLSPILHQRRATRGVTEYRPEHGTGSAWTSGQDEARELRAYDRIREEPARGRKSAPRNGREVNGNVAAPERAPGNAKRHGKGRRVAPGQELPSVRTWFAGESRDGSPRPGGRRGLAGATTGNRGAAGGRSRGAPAAGSPYAGTGGSGNRAPANRPGHAGRGQGGNRAPGSPRPKGHGGGRPPGRGGNRSGNR*