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scnpilot_solids2_trim150_scaffold_4407_5

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(3101..3577)

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VY35_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 87.3
  • Coverage: 158.0
  • Bit_score: 274
  • Evalue 9.50e-71
AraC family transcriptional regulator {ECO:0000313|EMBL:EIL92126.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 158.0
  • Bit_score: 274
  • Evalue 1.30e-70
helix-turn-helix transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 156.0
  • Bit_score: 233
  • Evalue 3.40e-59

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
ATGGGCCAGAATCCCGAATTGTTGCGCCGCCTGCTGCGCGCGAAGGACCGGATGGACGCGGCCTCCCACGAGGAGTGGCCGGTCCGGCGGCTGGCGCAGGTGAGCGCGGTGTCGGCGGCGCACTTCGCGCGTTCGTTCCGGGAAGCGTTCGGCGTGCCGCCGCATCGCTATCTGCTCACGCGCCGGATCGAACGCGCCACGGCGCTGCTGCGCGATGGCGATCTGCCGGTCACCGAGGTCGCGCTGCGGACCGGTTGGAACAGCATCGGCACGTTCGGGCGGATCTTCCGCGACATCACCGGCGAGAGTCCGGGCGAATTCCGCGCGCGCCAGCGCGCGATCGGGCATGGACACGGACATGTTCCGGAATGCTTCGTGCGCGCCGCGCACCGGCCCGACCTCAGGAGCGCAGTTTCGGAGAAGCGCCGCCGTGCGGCCCCCGGTAAAAAGGCACTCCAATCCACGGAGGTCCCATGA
PROTEIN sequence
Length: 159
MGQNPELLRRLLRAKDRMDAASHEEWPVRRLAQVSAVSAAHFARSFREAFGVPPHRYLLTRRIERATALLRDGDLPVTEVALRTGWNSIGTFGRIFRDITGESPGEFRARQRAIGHGHGHVPECFVRAAHRPDLRSAVSEKRRRAAPGKKALQSTEVP*