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scnpilot_solids2_trim150_scaffold_4413_6

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(4981..5607)

Top 3 Functional Annotations

Value Algorithm Source
23S RNA-specific pseudouridylate synthase (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 90.8
  • Coverage: 184.0
  • Bit_score: 350
  • Evalue 3.30e-94
Pseudouridine synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WJX6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 184.0
  • Bit_score: 352
  • Evalue 2.70e-94
23S RNA-specific pseudouridylate synthase {ECO:0000313|EMBL:EIL95324.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 182.0
  • Bit_score: 351
  • Evalue 6.60e-94

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
ATGATCGACATCCTCTACCAGGACGACGCGCTGATCGCGGTGAACAAGCCCGCGAACCTGGCCGTGTACCTGGCGCACCGGCTCGACCGCGCCACCAGCGGCGTGCTGCTGGTGGCGCGCAGCAAGGAGGTCGCCGCCGCGCTTGGCGAGCAGTTCATGCAGCGCACGGTGCACAAGCAATACCTGGTGGTGGTGCGCGGCTGGCCGGAGCCGGCCGAAGGCGTGATCGACTATCCTCTGCCCGGCTCGCGCGAAACCGGCCCGCGCCGCGAAGCGCGCACGCGCTACCGGCGCCTGGCCACGATCGAGGTGCCGATCGCACTCGGCCGCTACCCGCAGCAACGCTACGCACTGCTGCTGGCGGAGCCTGAGAGCGGCCGCTTCCGCCAGATCCGCAAGCACCTGGCGCACATCCATCACCCGGTGATCGGCGACTGCCAGCACGGCCGCGGCGACCACAACCGCCTCTACAAGCAGCACTTTGCCTGCCACCGGATGCTGCTGCACGCGTGGCGGCTTTCGTTCGCGCATCCGGTGAGTGGCGCGCCGATGCAACTGGAGGCGCCGCTGGACGAGGCATTCGCGCGATTGCTGGCGCAGTTCGGCTGGGGCTTGAAGCAGGAGTGA
PROTEIN sequence
Length: 209
MIDILYQDDALIAVNKPANLAVYLAHRLDRATSGVLLVARSKEVAAALGEQFMQRTVHKQYLVVVRGWPEPAEGVIDYPLPGSRETGPRREARTRYRRLATIEVPIALGRYPQQRYALLLAEPESGRFRQIRKHLAHIHHPVIGDCQHGRGDHNRLYKQHFACHRMLLHAWRLSFAHPVSGAPMQLEAPLDEAFARLLAQFGWGLKQE*