ggKbase home page

scnpilot_solids2_trim150_scaffold_4479_2

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(384..2030)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2S2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 553.0
  • Bit_score: 1036
  • Evalue 0.0
TonB-dependent receptor {ECO:0000313|EMBL:EIL93763.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 553.0
  • Bit_score: 1036
  • Evalue 0.0
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 548.0
  • Bit_score: 754
  • Evalue 2.00e-215

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1647
ATGGGCGGCCTCGGCCGCGGCATGATCGAGAACACGCAGAAGACCTTCAGCCTCACCACCGGCTTCAAGGGCACGTTCGGCCAGGCCTGGGATTACGAGGCCTCGCTCAGCCACTCGCAGTACAAGGCGCTGATCAGCTGGCCGCAGACCGTCGCCGCGAAGGCCAACGATCTCTACCTCGGCCCGCAACTGGGCGTGGACCCGGACAGCGGCCTGCCGATCTTCGACGCCGATCCCGTCCGCCTGTACACGCCGCTGACCCGCGCCGAGTACGACGCGATCACCGCGCGCACCAACTACCACCCGGAATCGCGCAGCGACACGCTGGCGTTCACCCTGACCAACACCGCCTTGTTCAACCTGCCCGCCGGGCCGGCGGGTTTCGCCGGCGTGGTCGAGTTCGGCAACCAGGCCTACGACCTCAACCCCGACCCGCTGGCCACCCAGTACTACTACTACAGCTGGAAGGATTCCGACGGCCACGGCAGCCGCAACCGCTGGGCTACCGCCGGCGAGCTGCGCCTGCCGCTGCTGGAATCGCTCAACCTCAGCCTGGCCGGCCGCTACGACCAGTACCGCTTCTCCGGCCACAAGACCGGCAAGCTGACCTACAGCACCGGGCTGGAATGGCGCCCGCTCGACAGCCTGCTGCTGCGCGGCTCCTACGGCACCGCGTTCCGTGCGCCGGACCTGCACTACGTCTACGCCGGCATCGGCAACGACGAGACCTCCGGCAACGACTACTACCGCTGCCGCACCGAGGAGCCGGACGAGGACATCACCGACTGCTCGTATTCCGACGAAGGTCTGATCCGCACGCGCCAGGGCAACCGCGACCTGAACTCCGAGACCAGCACCTCCTGGACCGGCGGCTTCGTGTGGTCACCGACGCCGAACCTGGATCTCTCGGTGGACTACTTCAACATCCGCATGAAGAACCAGGTGCAGGACCTCAGCACCGACCGCATCCTGCAACTGGAAGCCGATTGCCGCATCGGCAAGGACGTCAACGGCAATCCGGTCGACCCGAACTCGCCCAGTTGCATCGACGCGGTGGCGCGCGTCACCCGCACCGCTGGTACGGGTCGCTTGTACGGCATCTTTGTCAACCCGATCAACGTCGCCAACGAGCGCACCAGCGGCATCGACGCCAGCGCGCACTACAAGCTGGAAACCGCGATCGGCACCTTCCGTTTCGCCGGCAACTACACCTGGACCCGCAACCACCTGTTCCAGCAATACCCCGGTGACCCGACCCGGGATGAACTGGCGGTCAACAGCGGCTTCGACATCCCGCGTGAAAAGACCAGCGCCAGCATCTCGTGGGAGCGCAAGGCCTGGTCGGCCACCTTGTTCGGCACCCGCCTGGGCCGCCTGCCAAACTCGTGGTCGTACGATCAGGTCGTCGACACCTCGGCCGGCGATCCCGCGTGGGTCCACGCCACTTACCGCTACAACGCCACCTTGCAGTACAAGTTCAGCGACCACGCCCAGCTGTCGCTGGCAGTGGACAACCTGTTCGACAAGATGCCCCCGCGCGACCCCACCTATACGTCGTATCCGTACTACGACATCTCATGGTTCGACGCTGCCGGCCGCAGCTACTTCGTGCAGTTCACCTACAAGTTCGGCGGCAGCGCGCTGTAG
PROTEIN sequence
Length: 549
MGGLGRGMIENTQKTFSLTTGFKGTFGQAWDYEASLSHSQYKALISWPQTVAAKANDLYLGPQLGVDPDSGLPIFDADPVRLYTPLTRAEYDAITARTNYHPESRSDTLAFTLTNTALFNLPAGPAGFAGVVEFGNQAYDLNPDPLATQYYYYSWKDSDGHGSRNRWATAGELRLPLLESLNLSLAGRYDQYRFSGHKTGKLTYSTGLEWRPLDSLLLRGSYGTAFRAPDLHYVYAGIGNDETSGNDYYRCRTEEPDEDITDCSYSDEGLIRTRQGNRDLNSETSTSWTGGFVWSPTPNLDLSVDYFNIRMKNQVQDLSTDRILQLEADCRIGKDVNGNPVDPNSPSCIDAVARVTRTAGTGRLYGIFVNPINVANERTSGIDASAHYKLETAIGTFRFAGNYTWTRNHLFQQYPGDPTRDELAVNSGFDIPREKTSASISWERKAWSATLFGTRLGRLPNSWSYDQVVDTSAGDPAWVHATYRYNATLQYKFSDHAQLSLAVDNLFDKMPPRDPTYTSYPYYDISWFDAAGRSYFVQFTYKFGGSAL*