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scnpilot_solids2_trim150_scaffold_11477_4

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(3212..3526)

Top 3 Functional Annotations

Value Algorithm Source
EmrB/QacA subfamily drug resistance transporter n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8B5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 81.0
  • Coverage: 105.0
  • Bit_score: 175
  • Evalue 2.30e-41
drug resistance transporter, EmrB/QacA subfamily similarity KEGG
DB: KEGG
  • Identity: 76.0
  • Coverage: 104.0
  • Bit_score: 170
  • Evalue 2.30e-40
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 105.0
  • Bit_score: 180
  • Evalue 1.00e-42

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Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
CTGGGCGGCAGTTTCTCCGCCTCGATCACCACGCTGATGTGGACCCGCGGCGCGGTGAACCACCACGAGCAGCTGGCCGAGCACATCACGCCCTACAGTCCGGTCAGCCAGGCCGCGATGCAGCAGCTGGGCCACGGCGATCCGCAGCTGGGCGGCAGCGTGATCAACGGCATGATCACCCAGCAGAGCTACCAGATCTCGTTCAACGAGGTGTTCCACGCGCTGGGCTGGATCTTCATCGGCCTGATGCTGGTGATCTGGCTGGCCAAGCCGCCGTTCACGCCGAAGGCGCGGCCGGTCGCTGGCGGGCACTGA
PROTEIN sequence
Length: 105
LGGSFSASITTLMWTRGAVNHHEQLAEHITPYSPVSQAAMQQLGHGDPQLGGSVINGMITQQSYQISFNEVFHALGWIFIGLMLVIWLAKPPFTPKARPVAGGH*