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scnpilot_solids2_trim150_scaffold_33917_2

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(277..840)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBZ8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 77.4
  • Coverage: 186.0
  • Bit_score: 284
  • Evalue 8.30e-74
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:EIL96989.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.4
  • Coverage: 186.0
  • Bit_score: 284
  • Evalue 1.20e-73
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 74.9
  • Coverage: 183.0
  • Bit_score: 274
  • Evalue 3.50e-71

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
GTGCTGCGCCAGGCGTGCCGGCAGGCGCGCGCATGGCAGCAGCAGGGGTACCGCATCCCGGTCTCGGTCAACGTCTCGCCGGTGCAGTTCCAGCACGCCGATTTCCCCGACTGGCTGGCCGAGGCGCTGGCCGAGAGTGGGCTCGATCCCGGCCTGCTCGAGCTGGAGCTGACCGAGCGCATGGTGATGTCCGGCGGCGACGTCACCGGCAACCTGCTGCAGCGGATCCGCCAGCGCGGCGTGCGCCTGTCGCTGGACGACTTCGGCACCGGCTACTGCAGCCTGTCCTACCTCAAGCATTTCCCGATCGACACCTTGAAGATCGACCGCGTGTTCGTGCACGACGTGATCGGCGACGCCGACACCGCCACCATCACCAGCGCGATCATCGCCATGGCGCAGCGGCTGGACAAGCTGGTGGTCGCCGAAGGGGTGGAGACCGAAGCGCAGGCCGCGTTCCTGCGCCAGGCCGGCTGCGCCGAACTGCAGGGCTTCCTGTTCGCCGCGGCACTGCCGGTCGCCGACTTCGAAAAGCTACTGACCGAACCCGCCCGCGCGACGTAG
PROTEIN sequence
Length: 188
VLRQACRQARAWQQQGYRIPVSVNVSPVQFQHADFPDWLAEALAESGLDPGLLELELTERMVMSGGDVTGNLLQRIRQRGVRLSLDDFGTGYCSLSYLKHFPIDTLKIDRVFVHDVIGDADTATITSAIIAMAQRLDKLVVAEGVETEAQAAFLRQAGCAELQGFLFAAALPVADFEKLLTEPARAT*