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scnpilot_solids2_trim150_scaffold_2476_6

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_69_103

partial RP 27 / 55 MC: 1 BSCG 30 / 51 MC: 5 ASCG 7 / 38 MC: 2
Location: comp(4059..5843)

Top 3 Functional Annotations

Value Algorithm Source
Lipid A export ATP-binding/permease protein MsbA {ECO:0000256|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01703};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 587.0
  • Bit_score: 997
  • Evalue 1.10e-287
Lipid A export permease/ATP-binding protein MsbA n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VN25_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 587.0
  • Bit_score: 997
  • Evalue 7.90e-288
  • rbh
lipid A export permease/ATP-binding protein MsbA similarity KEGG
DB: KEGG
  • Identity: 84.0
  • Coverage: 594.0
  • Bit_score: 977
  • Evalue 2.70e-282

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1785
GTGAGCGTCGACCGGGCCGCTGCGCCTGACGGCGGGAGCTGGCGGACCTACCGACGCCTGCTCGGCTACACGCAGCGCCACTGGCCGATCGGCCTGGTGGCGATGGCCGGCATGCTCGTCGACGGCGGCGGGCTGGCCCTGTTCACCGGGCTGTTGAAGCCGATGATCGACCAGCTGTTCACGCTGAAGGATCCGTTCCTGATCTTCTGGATGCCGATCTGGATCATCGGCATCTTCGGCGTGCGTTCGCTGGGTACCTTCGTCAGCGACTACGGCGTTTCCTACATCGGCCGACACGTGGTGCAGGCCATGCAGCACGACGTGTTCGCTGCCTACCTGAAGCTGCCGGCGCCGTTCTTCGGCAACGAGCCGTCGGGCCAGCAGGTGTCGCGCATCACCTATACCAGCGAGCAGGTCGCGGCCGCTTCCAGCAGCGCGGCCAAGATCGCCATCACCGACGGCTTCACGGTGATCGCGATGCTGTTCGTGATGCTCTACTACAGCCCCTATCTCACTCTCTCGCTGCTGGTGATGGTGCCGGCGATCGCGCTGGTGGCAACCGTGGTCAGCCGGCGTTATCGGCAGATCAGCCGGCGCATCCAGGGCAGCATGGGCTCGGTCACCGGCACGGTGGAGGAATCGGTCGGCGCCCATCGCGAAGTCCGCGTGTACGGCGGCCAGGCGCACGAGGCGGACCGCTTCGAGCGGATTACCCAGCATACCCGGCGACTCAACCTGAAGATCGCCGCCACCAACGCGGCATCCAGCTCGACCGTGCAACTGGTCGCCGCCAGCGCGTTGGCGGCGCTGGTCTTCCTGGGCACGCGGCCGCACGTGCTCGGCAGCATGTCGCCCGGCGTGTTCTTTGCCGTGCTGACGGCGATGGGCACCATGCTTCCGTCGCTGAAGCGGCTTACCACCGTGCAAGCGAACATCCAGCGTGGCCTGTCCGCGGCCGAAGACCTGTTCGACACCATCGACTTGCCGCCGGAAGTCGACCAGGGCTCGCGCGAGCTGGCGCGCACGCGCGGCGACCTGCGTTTCGAGGAGGTGCGGCTGACCTATCCGCGCAACGACTTCGAGGCCTTGCGCGGCATCGACCTGCATTGCGCGCCTGGCACGGTGACCGCCCTGGTCGGCCGCTCCGGCAGCGGCAAGAGCAGCCTGGCCAGCCTGCTGCCGCGTTTCTACGAACCCAGTGCAGGTCGCATCGTGCTGGACGGCGAGGACTATCGGGATTACACGCTGGCTTCGCTGCGCCGGCAGATCGCCTGGGTCGGGCAGAACGTGGTGCTGTTCGACGACACCGTGGCCAACAACATCGCCTACGGCGAGCTGGCCGGCGCCAGCGAGGCGGACATCGTCGCCGCCGCCGAGGCGGCCAATGCGATGGAGTTCATCGCACACCTGCCGCTGGGCATCCACACCCCGATCGGGCAGAGCGGCAACATGCTGTCCGGCGGCCAGCGCCAGCGCATCGCGATCGCCCGTGCGATCCTGAAGAACGCGCCGATCCTGGTGCTGGACGAGGCCACCAGCGCGCTCGATACCGAATCGGAGCAGCTGATCCAGCAGGCCTTGCAGCGCCTGATGCGCGACCGCACCACGCTGGTGATCGCGCATCGCCTGTCCACCGTCGAAGGCGCCGACCAGATCGCGGTGATGGAGCAGGGTCGCATCATCGAGCGCGGCACCCATGCCGAGCTGATTGCGCTGGACGGCCAGTACGCCGCGCTGCACCGGATGCAGTTCCACGACCACGCCGTGAATCTCGGCAGCGATTGA
PROTEIN sequence
Length: 595
VSVDRAAAPDGGSWRTYRRLLGYTQRHWPIGLVAMAGMLVDGGGLALFTGLLKPMIDQLFTLKDPFLIFWMPIWIIGIFGVRSLGTFVSDYGVSYIGRHVVQAMQHDVFAAYLKLPAPFFGNEPSGQQVSRITYTSEQVAAASSSAAKIAITDGFTVIAMLFVMLYYSPYLTLSLLVMVPAIALVATVVSRRYRQISRRIQGSMGSVTGTVEESVGAHREVRVYGGQAHEADRFERITQHTRRLNLKIAATNAASSSTVQLVAASALAALVFLGTRPHVLGSMSPGVFFAVLTAMGTMLPSLKRLTTVQANIQRGLSAAEDLFDTIDLPPEVDQGSRELARTRGDLRFEEVRLTYPRNDFEALRGIDLHCAPGTVTALVGRSGSGKSSLASLLPRFYEPSAGRIVLDGEDYRDYTLASLRRQIAWVGQNVVLFDDTVANNIAYGELAGASEADIVAAAEAANAMEFIAHLPLGIHTPIGQSGNMLSGGQRQRIAIARAILKNAPILVLDEATSALDTESEQLIQQALQRLMRDRTTLVIAHRLSTVEGADQIAVMEQGRIIERGTHAELIALDGQYAALHRMQFHDHAVNLGSD*