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scnpilot_solids2_trim150_scaffold_3422_2

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_69_103

partial RP 27 / 55 MC: 1 BSCG 30 / 51 MC: 5 ASCG 7 / 38 MC: 2
Location: comp(584..1321)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 242.0
  • Bit_score: 429
  • Evalue 2.90e-117
Pseudouridine synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4ND80_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 242.0
  • Bit_score: 429
  • Evalue 2.10e-117
  • rbh
pseudouridine synthase family protein similarity KEGG
DB: KEGG
  • Identity: 88.8
  • Coverage: 242.0
  • Bit_score: 429
  • Evalue 6.60e-118
  • rbh

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 738
GTGATCGTCACGCAATCGCCACGGCACGGATTGGCCCGCGTATTGTCCAAACTGGGTGTCTGCTCGCGCAGTCAGGCCGAACAGTGGGTCCGCGCCGGTCGCGTCAGCCTGGACGGACGGGTGGTGCGCGATCCGTATCACCCGACATCGATCGACCGGCAGCAGGTTGCCGTCGATGGCCAGCCGGTGAAGCCGGCAGAGTGCGTCTACGTCGCTTTCAACAAGCCGCGCGGGCTGGTGGTCAGCGCGGCCGACGAGCATGGTCGCGCCACCGTCTACACCGCGCTGTCTGCCGCCGGCTTGCCGTGGCTGGGGCCGGTCGGTCGGCTGGACAAGGCCAGCGAAGGCCTGCTGCTGTTGAGCAATGACACCACCTGGGCAGCTGGCATCACCGATCCGGTCACGCACCTGGACAAGACCTACCACGTGCAGGTGACCGGCCAGCCGGATGCTGCGGCCTTGGCCGCGATGTTGGGCGGTGTCGAGGATGGCGGCGAGTGGCTGAAGGCGCGTCGGGCCAGTTTGCTGCGCGCGGGCGAGAAGAACGCCTGGCTGGAAGTGGTGCTGGACGAGGGTCGCAACCGGCAGATCCGCCGGTTGCTGGCCGCCCTGGGTTTCGACGTGCTGCGGTTGATCCGGGTGGCGATCGGGCCGCTGGCACTGGGCGAACTGGCGAAAGGGCAATGGCGCCGGCTGAGCGCCGACGAAGTGAAGGCGCTCGACGCCCGCAAGGCTTGA
PROTEIN sequence
Length: 246
VIVTQSPRHGLARVLSKLGVCSRSQAEQWVRAGRVSLDGRVVRDPYHPTSIDRQQVAVDGQPVKPAECVYVAFNKPRGLVVSAADEHGRATVYTALSAAGLPWLGPVGRLDKASEGLLLLSNDTTWAAGITDPVTHLDKTYHVQVTGQPDAAALAAMLGGVEDGGEWLKARRASLLRAGEKNAWLEVVLDEGRNRQIRRLLAALGFDVLRLIRVAIGPLALGELAKGQWRRLSADEVKALDARKA*