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scnpilot_solids2_trim150_scaffold_4759_1

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_69_103

partial RP 27 / 55 MC: 1 BSCG 30 / 51 MC: 5 ASCG 7 / 38 MC: 2
Location: 2..421

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.1 {ECO:0000256|SAAS:SAAS00088795};; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.1
  • Coverage: 139.0
  • Bit_score: 275
  • Evalue 5.20e-71
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC:1.17.7.1) similarity KEGG
DB: KEGG
  • Identity: 96.4
  • Coverage: 139.0
  • Bit_score: 273
  • Evalue 3.40e-71
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDM5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 97.1
  • Coverage: 139.0
  • Bit_score: 275
  • Evalue 3.70e-71

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 420
GCCTCGCGCACCGGCGAGGTGATCGTGGCGCAGGAGCTGCTGCAGACCATGGGCCTGCGCTCGTTCACCCCGCTGGTCACCGCCTGCCCGGGCTGCGGGCGCACCACCAGCGAGTTCTTCCAGGAGCTTGCCAAGACCGTGCAGGAACACGTGCGCGAACAGATGCCGGTGTGGCGCATCAAGTACGACGGTGTGGAGAACCTCACGCTGGCGGTGATGGGCTGCATCGTCAACGGTCCGGGCGAGTCCAAGCACGCCAACATCGGCATCTCGCTGCCCGGCAACGGCGAGGCGCCGGCGGCGCCGGTGTTCATCGACGGCGAGAAGGCGATGACCCTGCGCGGCGACAACATCGCCAGCGAGTTCGTGGGCATCCTCGACGACTACGTGGCGCGCAAGTACGTCGCCCGCAACGGCTGA
PROTEIN sequence
Length: 140
ASRTGEVIVAQELLQTMGLRSFTPLVTACPGCGRTTSEFFQELAKTVQEHVREQMPVWRIKYDGVENLTLAVMGCIVNGPGESKHANIGISLPGNGEAPAAPVFIDGEKAMTLRGDNIASEFVGILDDYVARKYVARNG*