ggKbase home page

scnpilot_solids2_trim150_scaffold_5904_1

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_69_103

partial RP 27 / 55 MC: 1 BSCG 30 / 51 MC: 5 ASCG 7 / 38 MC: 2
Location: 2..1375

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor NusA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKE7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 457.0
  • Bit_score: 872
  • Evalue 2.30e-250
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 457.0
  • Bit_score: 872
  • Evalue 3.20e-250
transcription termination factor NusA similarity KEGG
DB: KEGG
  • Identity: 98.9
  • Coverage: 457.0
  • Bit_score: 871
  • Evalue 1.60e-250

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1374
GACATCCGCGTGTCGATCGACCACAACACCGGCGAGTACGAGACGTTCCGCCGCTGGGAAATCATCGCCGACGACGGCGAGATGGAATCGCCGTCGTATCAGTTGCGCCTGATGGACGCGCTGGACGAGCGCGCCGACGCCAAGGTCGGCGAGTACATCGAGCAGCAGATCGAGAACGCCGAATTCGGCCGCATCGCCGCGCAGGCCGCCAAGCAGGTGATTGTGCAGCGCGTGCGCGAGGCCGAGCGCCAGCAGGTGGTCGACGCCTTCGCCGATCGCGTGGGCGAACTGGTCACCGGTATCGTCAAGCGCGTCGAGCGCGGCAACATCTACCTCGACCTGGGCAGCAACGCCGAGGCGTTCATTCCGCGCGACAAGACCATTCCGCGCGAATCGGCCCGGGTCGGCGACCGCGTGCGCGGCTACCTGTACGAAGTGCGCTCCGAGGCGCGCGGCCCGCAGTTGTTCGTGTCGCGCGCTGCGCCGGAATTCATGATCGAGCTGTTCAAGCTGGAAGTGCCTGAAGTCGGTCAGGGCCTGGTCGAGATCAAAGGCTGCGCGCGCGACCCGGGCGATCGCGCCAAGATCGCCGTGCTGGCCCACGACAGCCGCACCGATCCGATCGGCGCCTGCATCGGCATGCGCGGCTCGCGCGTGCAGGCGGTCTCCAACGACCTCAACGGCGAGCGCGTCGACATCATCCTGTGGCACGAGAACCAGGCGCAGTACGTCATCAACGCGATGGCGCCGGCCGAGGTGCAGTCCATCATCATGGACGAGGAAAAGCACTCCATGGACATCGCGGTGGCCGAGGACAAACTCTCGCAGGCGATCGGCCGCGGCGGCCAGAACGTGCGTCTGGCCAGCAAGCTGACCGGCTGGCAGCTCAACGTGATGACCCAGGACCAGGTCACCGCCAAGAGCGAGGCCGAGCAGGAAGCCGCGCGAGCGCTGTTCATGGACAAGCTCGAGGTGGACCAGGAGATTGCCGTGATCCTCGTGCAGGAAGGCTTCTCCAGCATCGAGGAGATCGCCTACGTGCCCAGCGCCGAGCTGCTCGCGGTGGAAGGTTTCGACGAGGACATCGTCGAGGAACTGCGTGCCCGCGCCCGCGACGCGCTGCTGACCGAGGCACTGGCGGTGGAAGAGGGCGTCGACGAACATCAGCCGACCGAGGAACTGCTGGCGCTGGAGGGCATGGACGAGGAGACGGCCTTTGCGCTGGCCGCGCGTGCGGTGACCACGGTCGACGACCTCGCCGACCTGGCGGTGGACGACCTGATCGACATCGAGGGCATGGACGAAGAACGTGCCGCGGCACTGATCATGGCTGCACGTGCGCCGATGATCGCGCGACTGGAGAAGGGCGGCTAA
PROTEIN sequence
Length: 458
DIRVSIDHNTGEYETFRRWEIIADDGEMESPSYQLRLMDALDERADAKVGEYIEQQIENAEFGRIAAQAAKQVIVQRVREAERQQVVDAFADRVGELVTGIVKRVERGNIYLDLGSNAEAFIPRDKTIPRESARVGDRVRGYLYEVRSEARGPQLFVSRAAPEFMIELFKLEVPEVGQGLVEIKGCARDPGDRAKIAVLAHDSRTDPIGACIGMRGSRVQAVSNDLNGERVDIILWHENQAQYVINAMAPAEVQSIIMDEEKHSMDIAVAEDKLSQAIGRGGQNVRLASKLTGWQLNVMTQDQVTAKSEAEQEAARALFMDKLEVDQEIAVILVQEGFSSIEEIAYVPSAELLAVEGFDEDIVEELRARARDALLTEALAVEEGVDEHQPTEELLALEGMDEETAFALAARAVTTVDDLADLAVDDLIDIEGMDEERAAALIMAARAPMIARLEKGG*