ggKbase home page

scnpilot_solids2_trim150_scaffold_29139_1

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_69_103

partial RP 27 / 55 MC: 1 BSCG 30 / 51 MC: 5 ASCG 7 / 38 MC: 2
Location: 2..1018

Top 3 Functional Annotations

Value Algorithm Source
Pyridoxal-dependent decarboxylase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTY7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 94.1
  • Coverage: 339.0
  • Bit_score: 646
  • Evalue 1.50e-182
Pyridoxal-dependent decarboxylase {ECO:0000313|EMBL:EIM02929.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 339.0
  • Bit_score: 646
  • Evalue 2.10e-182
PLP-dependent enzyme, glutamate decarboxylase similarity KEGG
DB: KEGG
  • Identity: 92.6
  • Coverage: 339.0
  • Bit_score: 634
  • Evalue 2.40e-179

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1017
CGCGAGCTGCACCAGCTCTCCGCCGCGCTGAAGAAGTCGGTGCCGTTCCACAGCCCGCGCTACATCGGCCACATGGCCTCCGACCTGCTGCTGCCGGGACTGGCCGCGCAGATGCTCACGCTGCCGTACAACCCCAACAACGTCAGCGAGGACGCCGCACCGGTCACCGTGGACCTGGAAGTGCAGGCCGGCCTGCAGCTGGCGCGCATGCTCGGCTATCCGCACGACCCGGCGCAGGACGCCTGCGCGTTCGGCCACCTCACCTCCGGCGGCACCTTGGCCAACTACCAGGCGCTGCGCCTGGCGCTGGCGCTGAAGGCGTTTCCGGTGGCGCTGCGCGCCGCCGGCGTACCGGAACTGACGCTGCCGACAGACGACTGGAGCGCGTTCAATCTTTCCACGGCCGACGCCATCACGCTGCTGCAGGCCTGGCAGCAGTGGCTGGGTACGCAGGCGCCGGCGCAGCGCACGCACTGGCTGCAGCGGGTGGAGCACGAGCGCATCGAGCAGCGCGGCCTGGCCGGCTTCTTCGCCGCGCACCCGCAGCTGCGCGTGCCGCTGGTGCTGGCGCCGGTCACCGCGCACTACTCGTGGAGCAAAGGACTGAAGCTGCTAGGTCTGGGCCGCGACCAGCTGGAGCTGCTGCCCACCGACGGCATGCGGCTGGACGGCGCCGCGCTGCGCGCCACGCTGGAGCGCTGCGCGCGCGAGCGCCAGCCCGTGCTGATGTGCGTGGCCGTGCTCGGCGGCACCGAGTACGGCACCATCGACCCGATCGACGCCGTGCTCGCCGCGCGGCAGGCCGCGCGCGCACGCGGGCTGGATTTCGCCGTGCACGTGGACGCCGCCTGGGGCGGCTACCTGGCCACGCTGTTCCGCCACGAGGACGGCTCGCTGCGCACGCGCGAGGAAGTGGCGGCCGACTACGTGCAGTTCCCCACCCCGGCGGTGCATGCGGCGTTCGCCGCGCTGGGCGAGACCGACTCGGTCACCGTCGACCCGCACAAGCTCGGCTAC
PROTEIN sequence
Length: 339
RELHQLSAALKKSVPFHSPRYIGHMASDLLLPGLAAQMLTLPYNPNNVSEDAAPVTVDLEVQAGLQLARMLGYPHDPAQDACAFGHLTSGGTLANYQALRLALALKAFPVALRAAGVPELTLPTDDWSAFNLSTADAITLLQAWQQWLGTQAPAQRTHWLQRVEHERIEQRGLAGFFAAHPQLRVPLVLAPVTAHYSWSKGLKLLGLGRDQLELLPTDGMRLDGAALRATLERCARERQPVLMCVAVLGGTEYGTIDPIDAVLAARQAARARGLDFAVHVDAAWGGYLATLFRHEDGSLRTREEVAADYVQFPTPAVHAAFAALGETDSVTVDPHKLGY