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scnpilot_solids2_trim150_scaffold_133

Search features with annotation key words

Displaying items 31-60 of 289 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_133_31
unknown

Not on your lists

comp(17422..17703)
DNA (282bp) protein (94aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_133_32
unknown

Not on your lists

17766..18374
DNA (609bp) protein (203aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_133_33
RBG_13_Bacteroidetes_44_24_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18402..19130
DNA (729bp) protein (243aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1Y811_9DELT
hypothetical protein
Tax=RBG_13_Bacteroidetes_44_24_curated
scnpilot_solids2_trim150_scaffold_133_34
Escherichia phage vB_EcoM_PhAPEC2, T4likevirus, Caudovirales, Viruses

Not on your lists


comp(19156..20460)
DNA (1305bp) protein (435aa)
DNA topoisomerase II (EC:5.99.1.3); K03164 DNA topoisomerase II [EC:5.99.1.3]
Gp52 topoisomerase II, medium subunit n=1 Tax=Enterobacteria phage RB69 RepID=Q7Y4P7_BPR69 rbh
Topoisomerase II subunit {ECO:0000313|EMBL:AHV82956.1}; TaxID=1391224 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae; Tevenvirinae; T4likevirus.;" source="Escherichia phage vB_EcoM_PhAPEC2.;"
scnpilot_solids2_trim150_scaffold_133_35
Vibrio phage nt-1, Schizot4likevirus, Caudovirales, Viruses

Not on your lists

comp(20460..22313)
DNA (1854bp) protein (618aa)
similar to topoisomerase II; K03164 DNA topoisomerase II [EC:5.99.1.3]
Topoisomerase II large subunit n=1 Tax=Vibrio phage nt-1 RepID=R9TF65_9CAUD rbh
Topoisomerase II large subunit {ECO:0000313|EMBL:AGN30094.2}; TaxID=115992 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae; Tevenvirinae; Schizot4likevirus.;" source="Vibrio phage nt-1.;"
scnpilot_solids2_trim150_scaffold_133_36
unknown

Not on your lists

comp(22354..22695)
DNA (342bp) protein (114aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_133_37
unknown

Not on your lists

comp(22739..23113)
DNA (375bp) protein (125aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_133_38
unknown

Not on your lists

comp(23155..23514)
DNA (360bp) protein (120aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_133_39
unknown

Not on your lists

comp(23538..24206)
DNA (669bp) protein (223aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_133_40

Not on your lists

comp(24209..24949)
DNA (741bp) protein (247aa)
Putative uncharacterized protein n=1 Tax=Synechococcus phage S-CRM01 RepID=F5B3Z5_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:KKM67231.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_solids2_trim150_scaffold_133_41
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24974..25636)
DNA (663bp) protein (221aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|SAAS:SAAS00109037};; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
scnpilot_solids2_trim150_scaffold_133_42
unknown

Not on your lists

comp(25681..26331)
DNA (651bp) protein (217aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_133_43
Cronobacter phage vB_CsaM_GAP32, Caudovirales, Viruses

Not on your lists

comp(26354..27478)
DNA (1125bp) protein (375aa)
Ribonucleotide-diphosphate reductase subunit beta {ECO:0000313|EMBL:AFC21750.1}; EC=1.17.4.1 {ECO:0000313|EMBL:AFC21750.1};; TaxID=1141136 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Cronobacter phage vB_CsaM_GAP32.;"
nrdB; ribonucleotide-diphosphate reductase subunit beta (EC:1.17.4.1); K00526 ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] rbh
Ribonucleotide-diphosphate reductase subunit beta n=1 Tax=Cronobacter phage vB_CsaM_GAP32 RepID=K4F9M0_9CAUD rbh
scnpilot_solids2_trim150_scaffold_133_44
Oligella urethralis, Oligella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27491..29947)
DNA (2457bp) protein (819aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=1401065 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Oligella.;" source="Oligella urethralis DNF00040.;"
nrdA; ribonucleoside-diphosphate reductase subunit alpha; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] rbh
Ribonucleoside-diphosphate reductase n=1 Tax=Synechococcus phage S-SM2 RepID=E3SJ63_9CAUD rbh
scnpilot_solids2_trim150_scaffold_133_45

Not on your lists

comp(30059..30580)
DNA (522bp) protein (174aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL11758.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_solids2_trim150_scaffold_133_46

Not on your lists

30634..31281
DNA (648bp) protein (216aa)
UPI0003CE78D8 related cluster n=1 Tax=unknown RepID=UPI0003CE78D8
Uncharacterized protein {ECO:0000313|EMBL:KKM90836.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_solids2_trim150_scaffold_133_47
Tetrahymena thermophila, Tetrahymena, Hymenostomatida, Oligohymenophorea, Eukaryota

Not on your lists

31283..31939
DNA (657bp) protein (219aa)
TPR Domain containing protein n=1 Tax=Tetrahymena thermophila (strain SB210) RepID=I7MI78_TETTS
TPR Domain containing protein
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EAR90963.1}; TaxID=312017 species="Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Hymenostomatida; Tetrahymenina; Tetrahymenidae; Tetrahymena.;" source="Tetrahymena thermophila (strain SB210).;"
scnpilot_solids2_trim150_scaffold_133_48
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

31976..35272
DNA (3297bp) protein (1099aa)
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6STP9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU30016.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_133_49
unknown

Not on your lists

35283..36227
DNA (945bp) protein (315aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_133_50
unknown

Not on your lists

36278..37072
DNA (795bp) protein (265aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_133_51
unknown

Not on your lists

comp(37065..37283)
DNA (219bp) protein (73aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_133_52
unknown

Not on your lists

37388..38182
DNA (795bp) protein (265aa)
uncharacterized LOC755339
scnpilot_solids2_trim150_scaffold_133_53
Xanthomonas euvesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38168..39157)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Xanthomonas campestris pv. vesicatoria (strain 85-10) RepID=Q3BZY0_XANC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ19936.1}; TaxID=316273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. vesicatoria (strain 85-10).;"
scnpilot_solids2_trim150_scaffold_133_54

Not on your lists

39313..40509
DNA (1197bp) protein (399aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN22047.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_solids2_trim150_scaffold_133_55
Polysphondylium pallidum, Polysphondylium, Dictyosteliida, Eukaryota

Not on your lists

40577..46264
DNA (5688bp) protein (1896aa)
PREDICTED: uncharacterized protein LOC102033029 n=1 Tax=Geospiza fortis RepID=UPI000395554D rbh
uncharacterized LOC753956 rbh
Uncharacterized protein {ECO:0000313|EMBL:EFA84423.1}; TaxID=13642 species="Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Polysphondylium.;" source="Polysphondylium pallidum (Cellular slime mold).;"
scnpilot_solids2_trim150_scaffold_133_56
unknown

Not on your lists

comp(46297..46989)
DNA (693bp) protein (231aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_133_57
Chondrus crispus, Chondrus, Gigartinales, Florideophyceae, Eukaryota

Not on your lists

comp(46989..48641)
DNA (1653bp) protein (551aa)
Stackhouse genomic scaffold, scaffold_90 n=1 Tax=Chondrus crispus RepID=R7QVC6_CHOCR
Stackhouse genomic scaffold, scaffold_90 {ECO:0000313|EMBL:CDF41411.1}; TaxID=2769 species="Eukaryota; Rhodophyta; Florideophyceae; Gigartinales; Gigartinaceae; Chondrus.;" source="Chondrus crispus (Carrageen Irish moss) (Polymorpha crispa).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_133_58
unknown

Not on your lists

comp(48654..49505)
DNA (852bp) protein (284aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_133_59
Trichoplax adhaerens, Trichoplax, Placozoa, Metazoa

Not on your lists

comp(49505..51757)
DNA (2253bp) protein (751aa)
Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RVE7_TRIAD
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EDV25487.1}; TaxID=10228 species="Eukaryota; Metazoa; Placozoa; Trichoplax.;" source="Trichoplax adhaerens (Trichoplax reptans).;"
scnpilot_solids2_trim150_scaffold_133_60
Burkholderia sp. M701, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51779..52153)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. M701 RepID=V5YQH4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:BAO19186.1}; TaxID=326454 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. M701.;"
Displaying items 31-60 of 289 in total

View Taxonomy