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scnpilot_solids2_trim150_scaffold_3873_11

Organism: SCNPILOT_SOLID2_TRIM150_Plasmid_13

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 6460..7047

Top 3 Functional Annotations

Value Algorithm Source
Putative conjugal transfer TRAF transmembrane protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNY4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 195.0
  • Bit_score: 342
  • Evalue 2.00e-91
  • rbh
Putative conjugal transfer TRAF transmembrane protein {ECO:0000313|EMBL:EIM01176.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 195.0
  • Bit_score: 342
  • Evalue 2.90e-91
traF; plasmid conjugal transfer transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 195.0
  • Bit_score: 277
  • Evalue 4.30e-72

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 588
ATGACGGTCATTCCCATCACCGACACTGCGTCTCGTCCTCGCTCGCGCCGGTACGCTCGCCTCGTGCTCGCGGCGTTGTCCGCCGGCGGCCCCGCTGCGCTGGCCTGGGCGTCCTTCGTGTCGCCGTTGCCGCGTCTGGTCTACAACCCGTCCGACAGCGTGGCGGTCGGCTGGTATCGCGTCGATCCGCTCGTACGTCATGCCGGCTCGCTGTCACCTGCGATGCACGTCGGCAGCATCGTGCTGGTGCCGTTGCCGGCCGCCGCCGCCGCACTGGCTGCGCGGCGCGGCTACCTGCCATCGCGCATCCCGCTGCTCAAGCCGGTCGCTGCCGTCGCGCCGCAGCAGGTGTGCATCGCCGAGGGCAGTGTGCGCATCGATGGCATGCCGGTGGCTGCCGCGTTGCGTATCGATGGGATGGGCCGACCGCTGCACGCCTGGTCGGCCTGCCGGCGTCTTCGCCCTGGCGAACTGTTCCTGCTCAGTACGACCAATCCGGCGTCGTTCGACAGCCGGTATTTCGGACCGGTGCGCGCCGATGCCGTGCTCGGCGTGGCGCATCCGATCTGGCTGGAGAAGCGGCCATGA
PROTEIN sequence
Length: 196
MTVIPITDTASRPRSRRYARLVLAALSAGGPAALAWASFVSPLPRLVYNPSDSVAVGWYRVDPLVRHAGSLSPAMHVGSIVLVPLPAAAAALAARRGYLPSRIPLLKPVAAVAPQQVCIAEGSVRIDGMPVAAALRIDGMGRPLHAWSACRRLRPGELFLLSTTNPASFDSRYFGPVRADAVLGVAHPIWLEKRP*