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scnpilot_solids2_trim150_scaffold_378_curated_21

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: 21221..22288

Top 3 Functional Annotations

Value Algorithm Source
putative transposase for insertion sequence element n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237B023 similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 327.0
  • Bit_score: 358
  • Evalue 8.50e-96
Transposase family protein {ECO:0000313|EMBL:EJJ02095.1}; TaxID=745408 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. JVH1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 330.0
  • Bit_score: 352
  • Evalue 8.60e-94
transposase IS204/IS1001/IS1096/IS1165 family protein similarity KEGG
DB: KEGG
  • Identity: 52.1
  • Coverage: 332.0
  • Bit_score: 338
  • Evalue 2.90e-90

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Taxonomy

Rhodococcus sp. JVH1 → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1068
GTGATCTGCCGGGACCGCGCCGGGGCCTACGCCCAGGGCGCCCGCGACGGCGCGCCAGATGCGATCCAGGTCGCCGATCGGTGGCACCTGTGGCACAACCTCGGCGATGCGGTGGACAAGACCGTCGCCGCGCACCGGGCCTGCCTACGCGAGGAGCCCGTCGCCGACCCTGCGGGTGATCCGGCCTGGCGGATGCCTGCAACGCCAACGCCGCCCGAGCCGGCCGAGACACGTCTGGCCGCGCGCACCAAGCAGCGGCACGCCGACGTGCAATCCCTGGTGCGCAAGGGGTATCCGATCAGCCGCATCGCCCGTGAGCTGCGGCTGGACCCGCACACCGTGCGGCGTTTCGCCACCGCCACCGGCCTGGATGAACTGCTGGCCAAGACCACCTCGCGCGGCACCCTGCTCGACGAGTTCACCGCGCACCTGCACCGCCGGTGGAACCAGGGCGTCACCGACGCCGCAGTCCTTTACCGGGAGATCGCCGCCGAGGGCTACCGCGGCAGCGAGCAGACCGTGCGCCGCTACCTGCGCCCGTTCCGGGCCGGTGCCGCCGCACCGCCGCCGGTGCACCAACCGCCCAAGGTCCGCCACCTGGCCGGCTGGATCATGACCGACCCGGACCACCTCGACGAGCAGGACCAGGCCCAACTCGAGGATGCCCGGGCCCGCTGCCCACACCTGGATGCCCTGGCCGGTCACGTCACCGAGTTCGCCAAGATCCTCACCGGCCTGCACGGCGAACGGCTGGACGACTGGATCCAGGCCATCGACGCCGACGACCTGCCCGCCATGCACTCCTTCACTGCCGGGCTGAAACACGATCACACCGCCGTCGTCAACGGCCTGACCATGACCCACAACTCCGGGGCAGTCGAAGGAAACGTCAACAGAGTCAAAATGATCAAACGACAAATGTACGGCCGCGCAAAATTCGACCTACTCCGAAAACGCGTCCTGATAAGGACACAACAAACCTTCACCGAATTTGTGCCAGAACCGATTCAGATGAGCGTCATCACCCGCGGGCGGCGGCCACGTGCGCGGCCGCGTTCATCGACCTGA
PROTEIN sequence
Length: 356
VICRDRAGAYAQGARDGAPDAIQVADRWHLWHNLGDAVDKTVAAHRACLREEPVADPAGDPAWRMPATPTPPEPAETRLAARTKQRHADVQSLVRKGYPISRIARELRLDPHTVRRFATATGLDELLAKTTSRGTLLDEFTAHLHRRWNQGVTDAAVLYREIAAEGYRGSEQTVRRYLRPFRAGAAAPPPVHQPPKVRHLAGWIMTDPDHLDEQDQAQLEDARARCPHLDALAGHVTEFAKILTGLHGERLDDWIQAIDADDLPAMHSFTAGLKHDHTAVVNGLTMTHNSGAVEGNVNRVKMIKRQMYGRAKFDLLRKRVLIRTQQTFTEFVPEPIQMSVITRGRRPRARPRSST*