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scnpilot_solids2_trim150_scaffold_626_curated_19

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: comp(19461..20333)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Sinorhizobium medicae RepID=UPI00037365CA similarity UNIREF
DB: UNIREF100
  • Identity: 46.3
  • Coverage: 283.0
  • Bit_score: 257
  • Evalue 1.70e-65
binding-protein-dependent transport system inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 276.0
  • Bit_score: 256
  • Evalue 9.00e-66
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABR62127.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.4
  • Coverage: 276.0
  • Bit_score: 256
  • Evalue 4.00e-65

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Taxonomy

Sinorhizobium medicae → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 873
ATGACGGTCGCCACCGTTGCCGCACCGAGGCGCCTGCTTCGTCGCCTCTCGTCGAAGGACTCGGTGCTGACGGCGGCGCTGGTCGGTGTTGCTCTGCTGGTGCTGATCGTGGTGTTCGGACCGATGATCTGGCACCTGCAGCCCAATGCGGTCGACCTGTCGGCACAGCTGACCGGGCCGTCCGGCGCCCACCCGCTCGGCACCGACGGGCTCGGCCGCGACATGCTGGCCCGGGTGCTGGTCGGTGCGCGCACCTCGCTCGGTGCCGGGCTCATCATCGCCCTGGCCGGGGCGGTACTCGGGTGTATCACGGGGCTGCTGGCCGGCGCGCTGGGAGGCTGGGTGGACACCGCGCTGACCTGGCTGACGAACTCGATCCTGTGCTTCCCCTCCATCATGCTCGCCATGGCCGTGGTGATGGCCATGCAGCCCGGCGTCACTGCCGTGGTGATCGGCCTGTCGATCCACTCGTTCCCGTGGTACATGCGAACGCTGCGAGGCGAGGTGCTGCGCATCTCGTCTCTGGATTTCGTCAAGTCCACCAACGCCATTGGGGCAACTCGGCGCCGGATCCTGTTCGTGCACATCTTCCCGCACCTGATCTCGACCATCCTGCTGCAGATGGCCGCGGTCTTCGGGGCGTCCGTCCTCGCGTTGGCCGCCCTGGGATTCCTCGGCATGGGCGCGCAGCCGCCCACCGCGGAACTGGGCGCCATGATCACCGACGGCCAGCAGTACTTCCTGACCGGCCAATGGTGGATCTCGGGCTTTCCGGGGTTGGTGCTGCTGATCGCGGTATCGCTGACGACCGTCATCGCGGACCGGGCACGGGATCTGCTCGATCCGCGCGGCAAGTTCGTCGTGGCCGAGTAG
PROTEIN sequence
Length: 291
MTVATVAAPRRLLRRLSSKDSVLTAALVGVALLVLIVVFGPMIWHLQPNAVDLSAQLTGPSGAHPLGTDGLGRDMLARVLVGARTSLGAGLIIALAGAVLGCITGLLAGALGGWVDTALTWLTNSILCFPSIMLAMAVVMAMQPGVTAVVIGLSIHSFPWYMRTLRGEVLRISSLDFVKSTNAIGATRRRILFVHIFPHLISTILLQMAAVFGASVLALAALGFLGMGAQPPTAELGAMITDGQQYFLTGQWWISGFPGLVLLIAVSLTTVIADRARDLLDPRGKFVVAE*