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scnpilot_solids2_trim150_scaffold_732_curated_9

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: comp(11453..11971)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Nocardia sp. BMG111209 RepID=UPI00036D2A88 similarity UNIREF
DB: UNIREF100
  • Identity: 68.4
  • Coverage: 171.0
  • Bit_score: 233
  • Evalue 1.20e-58
RNA polymerase sigma-54 factor RpoN {ECO:0000313|EMBL:AIY19332.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.7
  • Coverage: 172.0
  • Bit_score: 244
  • Evalue 1.20e-61
putative RNA polymerase ECF subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 169.0
  • Bit_score: 223
  • Evalue 3.80e-56

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Taxonomy

Pimelobacter simplex → Pimelobacter → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 519
GTGAAGCAGTCGTTCGAAGGCATCGTCGAACAGCACGGTCCCACGGTGCTGCGGATGTGTCGTGTGCTGCTCGGCCCGCAGGACGCCGAGGACGCCTGGTCGGAGACCTTCATCTCGGCGCTGCGCGCCTACCCGGAACTTCCGGACGACGCGAACGTCGAGGCCTGGTTGGTGACCATTGCGCATCGCAAGGCCATCGATATCCTCCGGGCCGCCCGGCGACGGCCGCTGCCGGTCGACGAACTTCCGGACCCCCGAACCTCGCCGGCCACCACCATCGGGGCCCCGGCGGAGCCCGACGTCAGTGTCGAGCATCTCGAGTTGTGGGCTGCGGTGCGGCGGCTGCCGGACAAGCAGCGTCAGGCGGTGGCCTACCACTATGTCGCCGGACTGGCCTACGCCGAGGTCGCGTCGATCCTCGGCGGCAGCACGGATGCCGCCCGCCGTGCTGCGGCCGACGGCATCAAGAACCTCCGGAAGAGCTATTCGGGCGCGACCACGAAAGGAGCGACATCATGA
PROTEIN sequence
Length: 173
VKQSFEGIVEQHGPTVLRMCRVLLGPQDAEDAWSETFISALRAYPELPDDANVEAWLVTIAHRKAIDILRAARRRPLPVDELPDPRTSPATTIGAPAEPDVSVEHLELWAAVRRLPDKQRQAVAYHYVAGLAYAEVASILGGSTDAARRAAADGIKNLRKSYSGATTKGATS*