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scnpilot_solids2_trim150_scaffold_319_curated_29

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: comp(32312..32911)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI0003719303 similarity UNIREF
DB: UNIREF100
  • Identity: 49.1
  • Coverage: 161.0
  • Bit_score: 134
  • Evalue 1.50e-28
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 164.0
  • Bit_score: 131
  • Evalue 3.00e-28
ECF subfamily RNA polymerase sigma-24 factor {ECO:0000313|EMBL:AEK43672.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.7
  • Coverage: 164.0
  • Bit_score: 131
  • Evalue 1.30e-27

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Taxonomy

Amycolatopsis mediterranei → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 600
GTGACGTTTGACGAGTTCCTGGACGCCGAGCTGACCGGCCTGCGCCGGTACGCCGCCGCCCTCACCGGGGACCGGCAGCGCGCCCACGACGTGCTGGCCGATGTGCTGCTGCGGGCGCACACCGGCTGGGGCCGGATCGGCGCGATGGAGTTCCCGCTGGCGTACGTGCGCCGCATGGTCACCTCCACGTTCCTGTCCGAGAAGCGCCGCTGGTCGGTGCGCACGATCCGACCCACCAGAACCGGTGACCTGCCGGATGTGGCGCTGCCCGACCCGGCCAGCGCCGTCGACGACCGGGAACACCTGCAGCATCTGCTGGCCGCACTGCCGCCCCGGCAACGCGCGGCCGTCGTGCTGCACTTCTACCTCGAGCTGTCGTATGCCGAGATCGCCACCGAACTACGCATCAGCGAGGGCGGGGTGCGCACCACCGTCTCCCGCGCCCTGGCCACGCTGCGCATCGCCATCGGCGACGAGACGCCCGCCGACCCGTCCAGCACAACCGCACCGCCGGGCGGCGCGCGGATCCCCCGCACGGTTTACCAGCTGCGTGCTGCCCGTGTCCGAGATCCGCGCACCCGACAGCAGGAGGGCTCATGA
PROTEIN sequence
Length: 200
VTFDEFLDAELTGLRRYAAALTGDRQRAHDVLADVLLRAHTGWGRIGAMEFPLAYVRRMVTSTFLSEKRRWSVRTIRPTRTGDLPDVALPDPASAVDDREHLQHLLAALPPRQRAAVVLHFYLELSYAEIATELRISEGGVRTTVSRALATLRIAIGDETPADPSSTTAPPGGARIPRTVYQLRAARVRDPRTRQQEGS*