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scnpilot_solids2_trim150_scaffold_554_curated_15

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: comp(15622..16443)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.5
  • Coverage: 248.0
  • Bit_score: 312
  • Evalue 4.40e-82
kdpD; sensor histidine kinase (EC:2.7.3.-); K07646 two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] similarity KEGG
DB: KEGG
  • Identity: 68.9
  • Coverage: 219.0
  • Bit_score: 303
  • Evalue 6.00e-80
Osmosensitive K channel His kinase sensor n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4YX02_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 66.5
  • Coverage: 248.0
  • Bit_score: 312
  • Evalue 3.20e-82

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Taxonomy

Candidatus Microthrix parvicella → Candidatus Microthrix → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 822
ATGATCGACGCCGAACCGGATAGCACGGCACACGATTGCGACGGGACGCCCGCCGTGCGGGGCGCTGCGGTCTGCCCGGGCCGTCTGCGGGTGTATCTCGGTGCTGCTCCCGGGGTTGGCAAGACGGTCGCGATGCTGGCCGAGGGGCGCCGCCGGGCCGAGCGCGGCACCGACGTCGTGGTGGCCGTGGTCGAAGACCACGGCAGGGAATACACCGCCGCCCAGCTGGCCGGCATAGAGACGGTGGCTCGCCGCGCCGTAGCGCACCGCGGGATCACTCTGACCGACATGGATCTTCCCGCCGTGCTGGCCCGCCGGCCGCAGGTCGCGTTGGTCGACGAGCTGGCCCACACGAATGCTCCCGGGTCCGAACACGCCAAGCGCTGGCAGGACGTGACGGCGCTGCTCGATGCGGGTATCGACGTGATCACCACGGTCAACATCCAGCACTTGGAATCGCTCAACGACGTGGTTGCCGCCATCACCGGCATCGTCCAGTCCGAGACCGTCCCGGACCAGGTGGTCCGCTCCGCCGGCCAGGTCGAGCTGGTGGACATGACACCCGAGGCGCTGCGCCGGCGCATGTCCCACGGGCACGTCTACCCGCCGAACATGATCGACCCGGCGCTGGCCAACTACTTCCGGGAAGGCAATCTCGGAGCGCTGCGCGAGCTGGCGTTGCTGTGGGTGGCCGACCCCCTGAGGCCGGCCGCGCATTCACGAACGCGCTTGTCCCTGCCGATGCTGGACGAGCTGGTTCCGGCCATAACGATCACTGCATTACTACTTGCCCCGCCCGGATCAGCCGCATCGTCAACCTGA
PROTEIN sequence
Length: 274
MIDAEPDSTAHDCDGTPAVRGAAVCPGRLRVYLGAAPGVGKTVAMLAEGRRRAERGTDVVVAVVEDHGREYTAAQLAGIETVARRAVAHRGITLTDMDLPAVLARRPQVALVDELAHTNAPGSEHAKRWQDVTALLDAGIDVITTVNIQHLESLNDVVAAITGIVQSETVPDQVVRSAGQVELVDMTPEALRRRMSHGHVYPPNMIDPALANYFREGNLGALRELALLWVADPLRPAAHSRTRLSLPMLDELVPAITITALLLAPPGSAASST*