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scnpilot_solids2_trim150_scaffold_2298_curated_1

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: 138..398

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S20 n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WRA7_ACTMD similarity UNIREF
DB: UNIREF100
  • Identity: 75.6
  • Coverage: 86.0
  • Bit_score: 128
  • Evalue 3.50e-27
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 86.0
  • Bit_score: 129
  • Evalue 2.20e-27
30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 similarity KEGG
DB: KEGG
  • Identity: 75.6
  • Coverage: 86.0
  • Bit_score: 128
  • Evalue 1.10e-27

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Taxonomy

Cryptosporangium arvum → Cryptosporangium → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 261
GTGGCCAACATCAAGTCCCAGATCAAGCGGAACAAGACCAATGAGAAGGCGCGGCTGCGCAACAAGTCGGTTCGCTCCGCGCTGAAGACGGCCGTGCGACGGTTCCGCTCCGCCGCGGACACCGGCGATAAGGACGCAGCGCTGGCCGAGCTGAAGGTCGCCTCCCGCGATCTGGACAAGGCCGTGAGCAAGGGCGTCATCCACGCCAACCAGGCCGCCAACCGCAAGTCCGCCATGGCGCAGCGGGTCAACGCACTGTAG
PROTEIN sequence
Length: 87
VANIKSQIKRNKTNEKARLRNKSVRSALKTAVRRFRSAADTGDKDAALAELKVASRDLDKAVSKGVIHANQAANRKSAMAQRVNAL*