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scnpilot_solids2_trim150_scaffold_494_curated_28

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: 27854..28261

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Humibacter albus RepID=UPI0003B7B05C similarity UNIREF
DB: UNIREF100
  • Identity: 81.3
  • Coverage: 134.0
  • Bit_score: 215
  • Evalue 3.40e-53
Transcriptional regulator {ECO:0000313|EMBL:AIJ26489.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.1
  • Coverage: 129.0
  • Bit_score: 173
  • Evalue 2.70e-40
transcriptional regulator RamA similarity KEGG
DB: KEGG
  • Identity: 63.6
  • Coverage: 129.0
  • Bit_score: 163
  • Evalue 6.30e-38

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Taxonomy

Amycolatopsis methanolica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 408
GTGAGCGCGGAGAACCAGGCACGCGAGCAGGCGAACCTGCGGCTGTTACGCGCCCGCAACCGGATGGATCGCCGGTACGCCGATCCGCTCGACGTCGCGCAACTTGCGGCATTGGCGTACCTGACGCGGGCCCATTTCATCCGCGAGTTCAAGCGGGTCTTCGGTGAGACGCCGTACCGGTACCTGCAACGGCGCCGGGTGGAGCGAGCGATGTTCCTGTTGCGGCATCACGACGACAGCGTCACCGACGTGTGCATGGCTGTCGGGTTCAGCAGTCTCGGGACGTTCAGCCGCACCTTCACCGAGATCGTTGGCCTGTCCCCCTCGGCCTACCGTGAGTCGGTCGCCGGCGAACGCCTGGTGGCACCCACCTCATTTGCGATGCGCTGGTCCCGACCGGTCGAGTGA
PROTEIN sequence
Length: 136
VSAENQAREQANLRLLRARNRMDRRYADPLDVAQLAALAYLTRAHFIREFKRVFGETPYRYLQRRRVERAMFLLRHHDDSVTDVCMAVGFSSLGTFSRTFTEIVGLSPSAYRESVAGERLVAPTSFAMRWSRPVE*