ggKbase home page

scnpilot_solids2_trim150_scaffold_214_curated_16

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: 16644..17435

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] similarity KEGG
DB: KEGG
  • Identity: 76.4
  • Coverage: 250.0
  • Bit_score: 379
  • Evalue 1.10e-102
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.4
  • Coverage: 250.0
  • Bit_score: 379
  • Evalue 4.90e-102
Pseudouridine synthase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XHP1_NAKMY similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 250.0
  • Bit_score: 379
  • Evalue 3.50e-102

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nakamurella multipartita → Nakamurella → Nakamurellales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 792
ATGTCTGAGCGACGCGGGGGAGCGGGTGCCGGATCCGGCGCGGACCGTTCCGGTGACGGTGACGGCGGCGAGCGGCTGCAGAAGGTGCTCTCCGCCGCCGGGGTGGCCTCGCGGCGGAAGGCCGAGGAGCTGATCCGCGCCGGGCGGGTACGGGTGGACGGTGTCGTCGTGCGCGAGATGGGAGTGCGCATCGACCCGGAGCGCGCGGTGGTGCACGTGGACGGCGACCGGGTGATCCTGCGACAGGACCTGGTGTACCTGGCGCTGAACAAGATGCCGGGAGTGCTGTCCACCATGTCCGACTCGGAGGGTCGACCGCACATCGGCCAGCTGCTGGCCGACTGGGGTATCACCGCTCGGCTGTTCCACGTCGGCCGGTTGGACATGGACTCGGAGGGCCTACTGCTGCTGACCAACGATGGCGAGCTGGCGCACCGGCTGACCCATCCGTCGTACGGCGTGCCGAAGACCTATATGGCCGAGGTGCCCGGCCCCATCCCGCGTGACCTGGGCCGCCGGCTCCGCGCCGGGGTCGACTTGGACGACGGCCCGGTGCGGGCCGAGTCGTTCGATGTGGTGGACGTGCTCGGGGGGCGGGCGGTGGTGCAGGTCGTGGTTCAAGAGGGCCGCAAGCACGTGGTGCGGCGGATGCTGGCCGCCGTGGGGCACCCGGTGTCCAGGCTGGTGCGAACCCGGATCGGTGAGGTGCAACTGGGCCATCAACGGCCCGGGACGCTGCGTAAGCTGAACCCCGTGGAAATTTCGCTGCTGTACCGGGCGGTGGGACTGTGA
PROTEIN sequence
Length: 264
MSERRGGAGAGSGADRSGDGDGGERLQKVLSAAGVASRRKAEELIRAGRVRVDGVVVREMGVRIDPERAVVHVDGDRVILRQDLVYLALNKMPGVLSTMSDSEGRPHIGQLLADWGITARLFHVGRLDMDSEGLLLLTNDGELAHRLTHPSYGVPKTYMAEVPGPIPRDLGRRLRAGVDLDDGPVRAESFDVVDVLGGRAVVQVVVQEGRKHVVRRMLAAVGHPVSRLVRTRIGEVQLGHQRPGTLRKLNPVEISLLYRAVGL*