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scnpilot_solids2_trim150_scaffold_1066_curated_1

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: comp(410..1393)

Top 3 Functional Annotations

Value Algorithm Source
glycine/betaine ABC transporter substrate-binding protein n=1 Tax=Nocardiopsis alkaliphila RepID=UPI00034D6E0C similarity UNIREF
DB: UNIREF100
  • Identity: 43.1
  • Coverage: 327.0
  • Bit_score: 263
  • Evalue 3.40e-67
Glycine/betaine ABC transporter substrate-binding protein {ECO:0000313|EMBL:EWT07434.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.7
  • Coverage: 332.0
  • Bit_score: 287
  • Evalue 1.80e-74
substrate binding domain of ABC-type glycine betaine transport system family protein similarity KEGG
DB: KEGG
  • Identity: 43.1
  • Coverage: 327.0
  • Bit_score: 260
  • Evalue 7.00e-67

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Taxonomy

Intrasporangium chromatireducens → Intrasporangium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 984
ATGAGGCGAGTACAAGCACGCACGATCGCGGCCGGCGCCGCGCTGGCACTGGCGGCCAGCTTGGTCGCTGCCTGCGGCAGCAACAGCAACACAGCAGACCCGGGCAGTGACGGGGCCGGTGGACCTGGTGCCCCGAGCGGCAGCGCAGCATCATCACGCTCCGGTGACGGTGCGTCCGCAGGCGATTCCGGCGACAAGGAGATCACCATCCCGATCGCGGCCGGCTGGGCCGAAGACATTGCGGTGACGAACTTGTGGAAATATGCGCTGGAGCAGGAGGGCTACAGCGTCGATACTCCGACGCTGGATATCGCGCCGATCTTCAAGGGCGTGTCGGCGGGTGATTACGACCTGTTCTTCGACGTGGCACTGCCCAACACGCACGCCGACTACTGGAAGCAATTCGGCGACCAGATCGAGGACCTCGGCGCCTGGTACGACAAGACGCAGAACACCCTCGTCGTCCCGGATTACATGGACATCGACAGCATCGCGGACCTGAAATCCATCGGCGACGAGGTCGACAAGACCATCATTGGCATCGATCCGGGCGCCGGCCTGACCCACACGACCAAGACCCGCATGATGCCCGCATACGGCCTGGACAAGGCCGGCTGGACGCTGAAGACCTCGTCCACCCCGGCGATGCTGTCCGCGTTGACGAAGGCCATCAAGGACCACCAGCCGATCGTCGTGACGCTGTGGCACCCGCACTGGGCCTACAGCGCCTTCCCGATCAAGGACCTCAAGGATCCCAAGGTGGGCATGGGCGAGCCCGACCACACCCACAAGGTCGCGAGCAAGGATTTCGCCGCGTCGCACGCCAACCTGATCGCCACGGTGAAGAAGTTCCACATGGATCCGGACATGCTGAGCTCGCTGGAGAAGGTCGTGCTGCAGGACTACGGCGACGGGAAGTACCAGGAGGGTGTGCGGGCCTGGGCGGCCGACCACCAGGATTTCGTGGACGGCATGCTGGGCTGA
PROTEIN sequence
Length: 328
MRRVQARTIAAGAALALAASLVAACGSNSNTADPGSDGAGGPGAPSGSAASSRSGDGASAGDSGDKEITIPIAAGWAEDIAVTNLWKYALEQEGYSVDTPTLDIAPIFKGVSAGDYDLFFDVALPNTHADYWKQFGDQIEDLGAWYDKTQNTLVVPDYMDIDSIADLKSIGDEVDKTIIGIDPGAGLTHTTKTRMMPAYGLDKAGWTLKTSSTPAMLSALTKAIKDHQPIVVTLWHPHWAYSAFPIKDLKDPKVGMGEPDHTHKVASKDFAASHANLIATVKKFHMDPDMLSSLEKVVLQDYGDGKYQEGVRAWAADHQDFVDGMLG*