ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_solids2_trim150_scaffold_1066_curated_21

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: comp(18451..19128)

Top 3 Functional Annotations

Value Algorithm Source
Peptidase C60 sortase A and B n=1 Tax=Streptomyces flavogriseus (strain ATCC 33331 / DSM 40990 / IAF-45CD) RepID=E8WC44_STRFA similarity UNIREF
DB: UNIREF100
  • Identity: 39.0
  • Coverage: 210.0
  • Bit_score: 134
  • Evalue 9.70e-29
peptidase C60 sortase A and B similarity KEGG
DB: KEGG
  • Identity: 39.0
  • Coverage: 210.0
  • Bit_score: 134
  • Evalue 3.10e-29
Peptidase C60 sortase A and B {ECO:0000313|EMBL:ADW05779.1}; TaxID=591167 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pratensis (strain ATCC 33331 / IAF-45CD).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.0
  • Coverage: 210.0
  • Bit_score: 134
  • Evalue 1.40e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Streptomyces pratensis → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 678
GTGTTGACAGCCGCCAGAAAGAAGAGCAACAACCGCGGCGGCCACCGGGTCTTTGTGGCCTCGATGGCCGCCGCGATCGCGGTCTTCGGACTGGCGGGGGTAGGCACCGCCATCGCGACAAGAGCCTCGTCTCCGCCGACGTCGGGGGCGTCACCATCGGACAGCGGATCGGCTCAGGTCGGCGACCCGTTACGCGACGGGCTTGGCCGGTCCGCTCCACAGCGCCTGCGCATCCCGTCGATCGGAGTCGACAGCCGGCTCACGGTCCTCGGCCTGCAGGACGACAACAAGACGATGCAGCTACCGGCTAGCGCTGGTCAGATCGGCTGGTACGACGGTTCGCCGACACCGGGCGAGAAGGGAACGTCCATCATCGCCGGGTACATCAAGGACGGTCGGCAATCGGGAGTCCTTGCGGATTTGTCCGGACTCAAGGTCGGTCAGGACGTCACCGTCTACCGCAAGGACGGCGCAGCAGTGGTATTCACGGTCGACGGGATCACGAAGTATCCGCATGGCACGTTTCCCGCCGACCAGGTGTACGCGGCGTCCAGCAGTCCAGCCCTGAGAATCGTCACCGTGGGCGGAACCCTGCGCCCGGGCGATCAACCAGGGAACGTCGTTGTGTACACGCACATCACTGCGGTTCACAACCGCGTGGCATCACCTCACGCCTGA
PROTEIN sequence
Length: 226
VLTAARKKSNNRGGHRVFVASMAAAIAVFGLAGVGTAIATRASSPPTSGASPSDSGSAQVGDPLRDGLGRSAPQRLRIPSIGVDSRLTVLGLQDDNKTMQLPASAGQIGWYDGSPTPGEKGTSIIAGYIKDGRQSGVLADLSGLKVGQDVTVYRKDGAAVVFTVDGITKYPHGTFPADQVYAASSSPALRIVTVGGTLRPGDQPGNVVVYTHITAVHNRVASPHA*