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scnpilot_solids2_trim150_scaffold_720_curated_20

Organism: solids_Actinobacteria_3

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: comp(21858..22964)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FA01_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 87.5
  • Coverage: 368.0
  • Bit_score: 620
  • Evalue 1.20e-174
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.9
  • Coverage: 368.0
  • Bit_score: 685
  • Evalue 5.80e-194
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 87.5
  • Coverage: 368.0
  • Bit_score: 620
  • Evalue 3.90e-175

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 1107
ATGCTGGTAGCAGAGCTTCAGGAGTTGGAGGAGGTCAAAAACCTCATGAACCGGGGTCAGCAGCTCGGCGTGCTGACCTTCGGCGACATCGCCAACGCGGTGTCGGAGGTGGACCTCGACGAGTCCGACGTCGAGGATCTTTACGGACATCTCGAGAAAGCGGGCATCGAGCTCGTCGAGGACATGGACCCCGCCCAGAAAGCGGCGGCGGAAGCCATGCCCGTCGACACCGGGAAAAAAGGCCGGCGGCGGCAGAAAGCCACGCTCGACCTGAAACCGGACATGACCACCGATTCCTTGCAGCTGTTCCTCAAGGACATCGGCAAAGTCCGCCTGCTGACCGCGGCGGAGGAGGTCGAACTGGCGAAGCGGATCGAGCGCGGTGACCTCGACGCCAAGCAGAAAATGGTCGAGTCGAACCTCCGCCTGGTCGTCTCGATCGCGAAAAATTATCGGAACCAGGGCCTGCCCTTCCTCGACCTGATCCAGGAGGGGACGCTCGGCCTCGTCCGCGCGGCGGAGAAGTTCGACTACCGCAAGGGGTTCAAGTTCTCCACCTACGCGACCTGGTGGATCCGCCAGGCGATCGCCCGGGCGCTCGCCGACAAGGCGCGGACCATCCGCATCCCGGTCCACGTGGTCGAGAAGCTGAACAAGATCGGCCGCGCCGAGCGCAAGCTGGTCACCGAGCTCGGCCGCGAGCCCACCCCGGAGGAGATCGCCGAGGTCACCGGGATCGACCCCGAGGAGGTCGACTCGATCAAGCGCTCCGCCCAGGCCCCGGTCTCCCTGGAGAAGCCGGTCGGTGACGAGGAGGAGTCCGAGTTCGGACAGTTCATCGCCGATGAGAAGGCCGAGTCCCCGTTCGATCGGGCGGCCGACCTGCTCACCAAAGAGGCCCTGAAGGAGGCCCTCGAGAACCTCTCCTACCGCGAGCGCCGCGTCCTCGAGCTCCGCTATGGGCTCGGCGGCGAGCACCCCCGGACCCTGGACGAGGTCGGCCGCACCTTCAACGTGACCCGCGAGCGGATCCGCCAGATCGAGAACCAGAGCCTCAAAAAGCTCCAGAGTCTCGGCGAGGCGCAGAAACTGCGCGAGGTCGCCTAA
PROTEIN sequence
Length: 369
MLVAELQELEEVKNLMNRGQQLGVLTFGDIANAVSEVDLDESDVEDLYGHLEKAGIELVEDMDPAQKAAAEAMPVDTGKKGRRRQKATLDLKPDMTTDSLQLFLKDIGKVRLLTAAEEVELAKRIERGDLDAKQKMVESNLRLVVSIAKNYRNQGLPFLDLIQEGTLGLVRAAEKFDYRKGFKFSTYATWWIRQAIARALADKARTIRIPVHVVEKLNKIGRAERKLVTELGREPTPEEIAEVTGIDPEEVDSIKRSAQAPVSLEKPVGDEEESEFGQFIADEKAESPFDRAADLLTKEALKEALENLSYRERRVLELRYGLGGEHPRTLDEVGRTFNVTRERIRQIENQSLKKLQSLGEAQKLREVA*