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scnpilot_solids2_trim150_scaffold_3503_curated_2

Organism: solids_Actinobacteria_3

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: 684..1163

Top 3 Functional Annotations

Value Algorithm Source
HTH-type transcriptional activator soxR homolog n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EIV3_9CHLR similarity UNIREF
DB: UNIREF100
  • Identity: 75.7
  • Coverage: 152.0
  • Bit_score: 229
  • Evalue 2.70e-57
HTH-type transcriptional activator soxR homolog {ECO:0000313|EMBL:CCF84615.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.7
  • Coverage: 152.0
  • Bit_score: 229
  • Evalue 3.80e-57
redox-sensitive transcriptional activator SoxR similarity KEGG
DB: KEGG
  • Identity: 70.5
  • Coverage: 149.0
  • Bit_score: 219
  • Evalue 8.70e-55

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Taxonomy

Nitrolancea hollandica → Nitrolancea → Sphaerobacterales → Sphaerobacteridae → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 480
GTGTCCGAACTGCTGACCATCTCCGAGACCGCGCGGCGCAGCGGCGTCGCCTCCTCCGCGCTCCGTTATTACGAAGAGCGCGGCCTGATCTCGGCGGCCGAGCGGGAGGGCTCCGGACATCACCGCCGTTATCCCCGCCCGGTGCTGCGGCGCATCGCCTTCATCGTCTTCGCCCAGAAGGTCGGCCTCAGCCTCGACGAGATCGCCGTCGAGCTGGCCAAGCTGCCGCCGCACGGCGCCCCCAAACGCAAGGACTGGTCGCGGTTGTCGGCCACCTGGCGCGGGCGCATCGACGAGCAGATCGCGGAGCTGGAACGCCTCAAGGAGGGCCTCACCGAGTGCATCGGCTGCGGCTGCCTCTCGCTCGACCGCTGCAAGCTGGCGAACCCGGGCGACCGCGCCGCCCATTTCGGCTCCGGCCCGCGCTACTGGCTGGGCGACCCCCGGCCGTCTCAGCCCGGCTCTGTCACAAAAGGTTGA
PROTEIN sequence
Length: 160
VSELLTISETARRSGVASSALRYYEERGLISAAEREGSGHHRRYPRPVLRRIAFIVFAQKVGLSLDEIAVELAKLPPHGAPKRKDWSRLSATWRGRIDEQIAELERLKEGLTECIGCGCLSLDRCKLANPGDRAAHFGSGPRYWLGDPRPSQPGSVTKG*