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scnpilot_solids2_trim150_scaffold_3503_curated_4

Organism: solids_Actinobacteria_3

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: comp(1643..3664)

Top 3 Functional Annotations

Value Algorithm Source
Putative PAS/PAC sensor protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARZ9_RUBXD similarity UNIREF
DB: UNIREF100
  • Identity: 33.2
  • Coverage: 578.0
  • Bit_score: 251
  • Evalue 2.80e-63
putative PAS/PAC sensor protein similarity KEGG
DB: KEGG
  • Identity: 33.2
  • Coverage: 578.0
  • Bit_score: 251
  • Evalue 8.70e-64
Putative PAS/PAC sensor protein {ECO:0000313|EMBL:ABG05829.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.2
  • Coverage: 578.0
  • Bit_score: 251
  • Evalue 3.90e-63

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Taxonomy

Rubrobacter xylanophilus → Rubrobacter → Rubrobacterales → Rubrobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2022
GTGGTGAGTTCGGTCGAGGAGCCGCTGGAGCAGGGGAGCGCGGCGCGAGCCGCCGGCCTGGTCACCTCCGTGCTCGACGCGGTGATCGTCCTCGACGAGGAGATGAAGGTGCGCGAGTGGAGCGACGCGGCGGGCGAGCTCTTCGGGATCGGGCGGGCCGGAGCGCTCGGCACCGACCTGGTCGAGCTGATCGTCCCCGCGGAGCTGTGCCCGGACGTCCGCGAGAGCCTCGGCGGCGAGGGGGACGCGGAGGAGGCCGTCGAGCTGCTCGGGCGGCGGATCGAACTGCCGGCGCGGCGCGGCGACGGCGTCAACTTCCACGCCGAGCTGACGGTCATCCGCGCCGGCGCGGAAGGTGGCGGGCCGACCGTCTTCGCCCGCGACGTGAGTCACCGCCTTGAAGCCGATCGCGCCCGCGCGCACATGGAGCAGGTGGTCGCCGGGAGCCGCGACGCCGTCTTCTCCAAAGACCTGCAGGGGATCGTGATGACCTGGAACCCCGCCGCCGAGCGCCTCTACGGCTACACCGCGGAGGAAGCGATCGGCCGCCACGTCTCCTTCCTGAAGCCGGAGGAGGTGAAACGGGAAGCTGACGAGATCCTCGCCAGCGTGCGACGGGGTGAACACCTGGAGGCGCACGAGACGCGACACGTCCGCAAGGACGGCGCGATGATCGACCTCTCCTTGACGACCTCGCCGATCGCCAGCGACTCGGGCTACCTCTACGGCGCCTCGGTGATCGCCCGCGACATCACCGGCGAACGCCGCCGCGAGCAGGCCCGCGACTTCCTGATCGCCGCGACGCGCGACCTCGACGCCTCGCTCGACCCGATCGAGACGGCGCGCAACATCGTCGCCAAGGCGGTCCCCGAGCTGGCCGAGCTCTGCATCATCGACTTCCTGCGCGACGACGGGCGGCTCGGCGACTCGGTCGCGGCGGCGGCGCTCCCCGGCGCGGCCGAGCGGCTCGAGCGGATCCGCCGCGAATCGCCGCTGGAGCCGGACGGCGACCACCCGGTGGCGCAGGTGCTGCGCGAGGGCGAGCCGACGATCTGGCGCGACCTGAGGGAGCCCACGGTGGCCGCGGCGGTCGCCCAGACGCCCGAGCACCGGGAGCTGATGGAGGACGCCGGCTACGAGTCCGCGGCGGTGGTCGGGCTCTTCGCCCGCGGGCGGAAGATCGGCGCGCTCTCCTTCCTCCACACCGACGCCGGCATCCGCTACGAGGAGGCCGACCTCGAGTTCCTCGGCGAGCTGGGCGAGCGCGCCGCGCTGGCGCTCGACAACGCGCGGCTCTACCAAGAGCGCGACGCGATCGCCCGCAACCTGCAGCGCGGCCTGCGCCCGCCGCGGCCGGTGCGGGTGGAGGGGATCGAGTCCGCGGTCGTCTTCGAGGCGGCCGGGCGGGGGATCGACATCGGCGGCGACCTCTACGACGTGATGCCGACCGAGGACGGCTGCTGGGTGCTGATCGGCGACGTGGCGGGCAAGGGGTCGGCGGCGGCCGGGGTGTCGGTGGCGCTGCGCCACGCGGTGCGCGGGCTGACCCGCGAGGTCGACGAGCCGGAGGAGGTGCTGGTCCGGGTCAACGAGCTGCTGCTCGAGGGGACCGGGCTGAACGACTTCGCCACCGCGGTGCTGGTGCGGCTCCGGGAGGACGCGAGCGGCCACTGGACGATCGCGTCGGCAGGCGCCGGCCATCCGCCGCCGGTCCACGTGCGCAAGGGCGGCGCCCGGCTGCTCGGCGGCGGCACCGTGCTGGGGGCGCTGAACGACGCCAAGGTGCAGCGCCACGACGCCGCCTTCGAACCGGGGGACACGCTGGTCCTCTGCACCGACGGCTGGCTCGAGGCGGGGCCGCCGTCCGAGCACCGCGATCCGCTCGACCTGGCGCGCCTGGCCGAGTACCTGGCGCCGCTGGCGCTGGAGGAGATGGTCGCGCGCCTGCGCGGCGACGCGGTCAGCCGGTCGGACGGCGAGCTCGAGGACGACATCGTCCTGCTCGCCCTGCGCCGGGTCTAG
PROTEIN sequence
Length: 674
VVSSVEEPLEQGSAARAAGLVTSVLDAVIVLDEEMKVREWSDAAGELFGIGRAGALGTDLVELIVPAELCPDVRESLGGEGDAEEAVELLGRRIELPARRGDGVNFHAELTVIRAGAEGGGPTVFARDVSHRLEADRARAHMEQVVAGSRDAVFSKDLQGIVMTWNPAAERLYGYTAEEAIGRHVSFLKPEEVKREADEILASVRRGEHLEAHETRHVRKDGAMIDLSLTTSPIASDSGYLYGASVIARDITGERRREQARDFLIAATRDLDASLDPIETARNIVAKAVPELAELCIIDFLRDDGRLGDSVAAAALPGAAERLERIRRESPLEPDGDHPVAQVLREGEPTIWRDLREPTVAAAVAQTPEHRELMEDAGYESAAVVGLFARGRKIGALSFLHTDAGIRYEEADLEFLGELGERAALALDNARLYQERDAIARNLQRGLRPPRPVRVEGIESAVVFEAAGRGIDIGGDLYDVMPTEDGCWVLIGDVAGKGSAAAGVSVALRHAVRGLTREVDEPEEVLVRVNELLLEGTGLNDFATAVLVRLREDASGHWTIASAGAGHPPPVHVRKGGARLLGGGTVLGALNDAKVQRHDAAFEPGDTLVLCTDGWLEAGPPSEHRDPLDLARLAEYLAPLALEEMVARLRGDAVSRSDGELEDDIVLLALRRV*