ggKbase home page

scnpilot_solids2_trim150_scaffold_2591_curated_6

Organism: solids_Actinobacteria_3

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: 3355..4269

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEN5_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 65.3
  • Coverage: 291.0
  • Bit_score: 362
  • Evalue 5.10e-97
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 65.3
  • Coverage: 291.0
  • Bit_score: 362
  • Evalue 1.60e-97
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB49709.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.3
  • Coverage: 291.0
  • Bit_score: 362
  • Evalue 7.10e-97

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Conexibacter woesei → Conexibacter → Solirubrobacterales → Thermoleophilia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 915
ATGGGTGACGAATGCGACACGTCGGGAGGACGCGGGGCCGGCGCCGACCTCGCCGCGCGATTCGAGTCCCTGCGTCCGCACCTGACCCGCGTGGCCTACGGGATCCTCGGCAGCATCGCCGAAGCCGAAGACGCCGTCCAGGAGGCCTGGCTGCGGCTCGGCCGCACCGACACGGCGGCGATCGAGGACCTACGGGCGTGGCTGACGACGGTGGTCGGCCGGATCGCCCTCGACGCGCTCGGCAGCGCCCGCCGCCGGCGCGAGAGCTACGTCGGCGAATGGCTGCCGGAGCCGCTGGTCGAGGAGTACGGCGAGGAGGAGAACCCGACCCTCGACGAGTCGGTGTCGACCGCGCTCCTCGTCGTGCTCGAGCGCCTCTCCCCCGCCGAGCGCACCGCCTTCCTCCTCCACGACGTCTTCGACCTGCCCTTCGAGAAGGTCGCCGCGGTGGTCGGGCGCTCGCCCGCGGCGGTGCGCCAGCTCGCCTCGCGTGCCCGCGGCCACGTCGAGGCCGGCAAGCCCCGCTTCCCCGCCGACCGCGGCGAAGAGGAGCGGATCGTCGCCGCCTTCGCCACCGCCTGGCAGGAGGGTGACCACGAGGCGCTGCTCGGGCTGCTCGACCCGGACGCGATCATGCGCTCCGACGGCGGCGGCCGCGTGCCCTCGGCGGGCAAGGCGCTGCTCGGCGCCGAGCGCATCGCCCGCGCCCTCGTCGCCTTCGCCCGCTCCGCCGACCGTCGCGGCGAAGAGCCGCGCGGCCGCGTCGCCAGCGTCAACGGCGCGCCGGGCCTGGTCGTCCACGACCGCTACTCGACCAGCGTCGTCTCGCTGACGATCGACGCCGGCCGCATCGCCGCCGTCGACATCGTCCGCAACCCGGAGAAGCTGCGCGGCCTGACCGAGGAGCCAGGCTGA
PROTEIN sequence
Length: 305
MGDECDTSGGRGAGADLAARFESLRPHLTRVAYGILGSIAEAEDAVQEAWLRLGRTDTAAIEDLRAWLTTVVGRIALDALGSARRRRESYVGEWLPEPLVEEYGEEENPTLDESVSTALLVVLERLSPAERTAFLLHDVFDLPFEKVAAVVGRSPAAVRQLASRARGHVEAGKPRFPADRGEEERIVAAFATAWQEGDHEALLGLLDPDAIMRSDGGGRVPSAGKALLGAERIARALVAFARSADRRGEEPRGRVASVNGAPGLVVHDRYSTSVVSLTIDAGRIAAVDIVRNPEKLRGLTEEPG*