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scnpilot_solids2_trim150_scaffold_2780_curated_6

Organism: solids_Actinobacteria_3

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: 5926..6579

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter med similarity UNIPROT
DB: UniProtKB
  • Identity: 54.2
  • Coverage: 216.0
  • Bit_score: 215
  • Evalue 5.90e-53
tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] similarity KEGG
DB: KEGG
  • Identity: 54.6
  • Coverage: 216.0
  • Bit_score: 213
  • Evalue 8.50e-53
tRNA pseudouridine synthase B n=1 Tax=Patulibacter americanus RepID=UPI0003B6FF85 similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 218.0
  • Bit_score: 220
  • Evalue 1.70e-54

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Taxonomy

Patulibacter medicamentivorans → Patulibacter → Solirubrobacterales → Thermoleophilia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGGCGCAGATCGACACCGCCGGCGCGGTGCTGCTCCTCGACAAGCCGGCCGGGAGGACCTCGCACGACGTCGTCGCCGCGGTGCGCCGCGAGCGCGGCGTGAAGGCGGGGCACGCGGGGACGCTCGACCCCTTCGCCACCGGCCTCCTGCTGGTGCTGCTCGGCACGGCGACGCGGCTGCAGCGCTTCCTCGTCGGCCTGCCGAAGACCTACCTGGCGACCGCGCGGCTCGGCTGGACCTCGACCACCGGCGACCCCGACGGCGAGCTGACCGAGACCGGCGTCGTGCCCGAGTCCCTGGAGCTGCCGACCGGGACGGTGCGCCAGCGGGTGCCGATGACCTCGGCGGTGCGGGTGGGCGGCGAGCGCCTCTACAAGAAGGCCCACCGGGGGGAGACGATCGAGACGCCGGTGCGCGACGTCGAGGTCCACCGGGCCGAGCTGCTGTCGGCCGGCGACGGCCTGGCCCACTACGAGATCGAGTGCAGCGCCGGGACCTACGTGCGGACGCTGATCGAGACGCTGGGCGACGCCTACTGCTCGGATCTGCGCCGCGTGGCGGTCGGCCCGTTCCGGGTCGAGGAGGCCGGACGGGAGGTCCCCACGGCCGAGGTGGCGGAGTTGGTGCCTGCCGTAGGCGACGCGCTGCGATGA
PROTEIN sequence
Length: 218
MAQIDTAGAVLLLDKPAGRTSHDVVAAVRRERGVKAGHAGTLDPFATGLLLVLLGTATRLQRFLVGLPKTYLATARLGWTSTTGDPDGELTETGVVPESLELPTGTVRQRVPMTSAVRVGGERLYKKAHRGETIETPVRDVEVHRAELLSAGDGLAHYEIECSAGTYVRTLIETLGDAYCSDLRRVAVGPFRVEEAGREVPTAEVAELVPAVGDALR*