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scnpilot_solids2_trim150_scaffold_3794_curated_8

Organism: solids_Actinobacteria_3

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: 5583..5855

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=1 Tax=Pseudomonas putida S12 RepID=V4H8C3_PSEPU similarity UNIREF
DB: UNIREF100
  • Identity: 46.2
  • Coverage: 65.0
  • Bit_score: 61
  • Evalue 7.20e-07
Uncharacterized protein {ECO:0000313|EMBL:AGL46554.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PA96.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.6
  • Coverage: 65.0
  • Bit_score: 60
  • Evalue 1.70e-06
transcriptional regulator, XRE family similarity KEGG
DB: KEGG
  • Identity: 40.8
  • Coverage: 76.0
  • Bit_score: 58
  • Evalue 1.50e-06

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 273
ATGCTCACCGTTCCGGACGCCTTCGCCGAGCTGCTCCTTGCAGCACGTCAGCAGGCGAACCTGACGCAAGAAGAGCTCGGCTTCCGCAGCGGCCTCGACCGGACCACGATCAGCGCCCTCGAGCGCGCCGCCGCCTCGCCCAAGCTGGAGTCCGTGATCCGCATCGCCGGAGCCCTCGGCCTCGAGCCGATGGCCCTCATGCCCGACGTCCGCTGGAGCCCGCCCGCGGAGGCTCCGGTGCCGAGCGGCGAGTTCGTCGAAAAGAGGGGTTGA
PROTEIN sequence
Length: 91
MLTVPDAFAELLLAARQQANLTQEELGFRSGLDRTTISALERAAASPKLESVIRIAGALGLEPMALMPDVRWSPPAEAPVPSGEFVEKRG*