ggKbase home page

scnpilot_solids2_trim150_scaffold_427_curated_21

Organism: solids_Actinobacteria_3

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: comp(27352..28587)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, CdaR family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SEA7_NOCSJ similarity UNIREF
DB: UNIREF100
  • Identity: 31.3
  • Coverage: 390.0
  • Bit_score: 155
  • Evalue 9.70e-35
CdaR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 31.3
  • Coverage: 390.0
  • Bit_score: 155
  • Evalue 3.10e-35
Transcriptional regulator, CdaR family {ECO:0000313|EMBL:ABL80142.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 31.3
  • Coverage: 390.0
  • Bit_score: 155
  • Evalue 1.40e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nocardioides sp. JS614 → Nocardioides → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1236
GTGGCCGCGGCGATCCTCGGCGAGCATATTTGCCGGGCTGTGCAGAACAAGCCACGGTACTTGGATCCCATCCAGCCAGCCTTGAGTGACGATTTCGTCCGCCTCGCGATGGCGCTCGAAGGTCAACTCGACAAGCTGAGCGGGGCGACGCTCGAGGGCCTGCGGGTCGAAGCGCCGATCTGGGCATCGGCGGAAGCGATCGGCGAAGAGGAAGTCGCCGCCTTCGTCCGCGCCAGCCTCGGCGCCCAGGTGCAGAGCTTCCGCCGGCGCGCCCTCCCCGAGCGCTGCCCCGACGTCGACGCGCACGGGGCGCGGGCGATCGCGCGGCTCGGCGACCTGAAGGCGATGCTGAGCGGCTATCGCATCGCCCACATGGTGCTGTGGGAGGCCTGGCTCGACCTGATCGAGGCCTCCGGCGCCGAGCCGGCGGTCCGCCGCGGGCTGCTGCGCTACGGGTCCCGCTTCTTCTTCCGCTACGCGGGGGTGCTCGGCGATTATGTGGCCGACAACTACCAGCTCGAACTCGAACAGTCGCTGCGCAGCGGCGAGCAGCGCCGCTTCCAGGTCGTCAAGGGGCTGCTGGAAGGGCGCTCGTCCCTGGGCGCCGAGCTCGATCTGAACCTCGAGCAGCACCACCTCGGGGTGCTCGCCTGGGGCGCCGGCGGGCAGGACGCGGCGCGCGAGCTGGCCGCGAGCATGGGGCGCCTGCTGCTCCTGGTCAGCCCGTTCGAGCGCGTCTGGTGGGGGTGGCTGAGCGGTGCCCAGCCGCTCGATCCCGCCGCCGAGGGGGCGGTCCGGGACCTGGCGCCGCCGCCCGGGACGGGACTGGCCGCCGGGCTCGACGGCTTCGGCGAAAGCGGCTTCCGCGCCACCCACCGGCAGGCGCAGCGGGCGCGCCGCATCGCCCTGCGGCTGGGGATCTCGGTCGTCCTCTACGCCGACGTCGCGGTCGAGGCGCTGCTCGGCGACAACACCGCCGACGCCCGCGCCTTCGTCGAGCACGAGTTGCACGGGATCGAGGACGATTCGGTCGCCTCCCGTCGCATTCGCGAGACGATCTCGGCCTACTTCGCCGCCGAGCACAACGCCGCCTCGGCGGCGGCGGTGCTGGGGGTCCACCAGCAGACGATCGCCAACCGCCTGCGCGCCGCCGAGGAGCGCATCGGGCATCCGGTCGCCTCGCGCCGGGTCGAGCTCGAAACGGCCCTGCGCCTGCGCGCGAGCCTCGACCTCTGA
PROTEIN sequence
Length: 412
VAAAILGEHICRAVQNKPRYLDPIQPALSDDFVRLAMALEGQLDKLSGATLEGLRVEAPIWASAEAIGEEEVAAFVRASLGAQVQSFRRRALPERCPDVDAHGARAIARLGDLKAMLSGYRIAHMVLWEAWLDLIEASGAEPAVRRGLLRYGSRFFFRYAGVLGDYVADNYQLELEQSLRSGEQRRFQVVKGLLEGRSSLGAELDLNLEQHHLGVLAWGAGGQDAARELAASMGRLLLLVSPFERVWWGWLSGAQPLDPAAEGAVRDLAPPPGTGLAAGLDGFGESGFRATHRQAQRARRIALRLGISVVLYADVAVEALLGDNTADARAFVEHELHGIEDDSVASRRIRETISAYFAAEHNAASAAAVLGVHQQTIANRLRAAEERIGHPVASRRVELETALRLRASLDL*