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scnpilot_solids2_trim150_scaffold_427_curated_23

Organism: solids_Actinobacteria_3

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: comp(30127..30720)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MS41_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 31.5
  • Coverage: 184.0
  • Bit_score: 69
  • Evalue 5.80e-09
Transcriptional regulator TetR family {ECO:0000313|EMBL:EHN09169.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 31.0
  • Coverage: 200.0
  • Bit_score: 66
  • Evalue 4.00e-08
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 28.0
  • Coverage: 200.0
  • Bit_score: 55
  • Evalue 2.10e-05

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Taxonomy

Patulibacter medicamentivorans → Patulibacter → Solirubrobacterales → Thermoleophilia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 594
ATGAACGTCGGTCCGTCCGCTGGCGTCGCCCAGGCCCGGGAGCGCAGGCATCTCGTCGGCGGCCTTTTCGTCGCGGTGGAGCGGCGCGGGCCGGCGGCGCTGACCGAGGAGGACGTGATCGCGGCCGCGGGGCCGGCGGGAGGGGCGTTCCACGAGCACTTCCGCGATCTCGACGAGTGCTTCGACTTCGCCTGCGAAGCGGCGCTCGACATCCTGCTGGGGCCGATGGTCGCGGCCTGGTCGGTGCCGCGCCGGCGCCCCGAGCGGCTCGGCGCGGCGCTGGCGGCGCTGCTCGGCGCCCTCGCCGCACAGCGGCGCCTGGCCGAGCTCTGCCTGCTCCACTCGCCGGTGCGCCAGGGGGACCGGCGGACGTATGAGCGCGTGGTCGACTCCCTCGCCGAGCTGCTGGTCGACGTCCGTCGTCCCCTCGCCGCGCCGGAGGCGCCCTCGGCGGCCGGTGAGCAGCTGCTCGCCCGCGGCGCGGTCGGGCTGATCGCGGCCCGCCTGCGGGAGGGGGGAGCGGACCTCGAGGAGCTCCGGCCGCGGCTGCTGGCGCTGCTGCTGCCCGCCCTGGAACTGGACGCGACGGACTGA
PROTEIN sequence
Length: 198
MNVGPSAGVAQARERRHLVGGLFVAVERRGPAALTEEDVIAAAGPAGGAFHEHFRDLDECFDFACEAALDILLGPMVAAWSVPRRRPERLGAALAALLGALAAQRRLAELCLLHSPVRQGDRRTYERVVDSLAELLVDVRRPLAAPEAPSAAGEQLLARGAVGLIAARLREGGADLEELRPRLLALLLPALELDATD*