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scnpilot_solids2_trim150_scaffold_2435_curated_5

Organism: solids_Actinobacteria_3

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: 3875..4522

Top 3 Functional Annotations

Value Algorithm Source
Collagen triple helix repeat protein n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1ACT2_THECD similarity UNIREF
DB: UNIREF100
  • Identity: 28.2
  • Coverage: 241.0
  • Bit_score: 73
  • Evalue 2.50e-10
Collagen triple helix repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 28.2
  • Coverage: 241.0
  • Bit_score: 73
  • Evalue 8.00e-11
Collagen triple helix repeat protein {ECO:0000313|EMBL:ACY97421.1}; Flags: Precursor;; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 28.2
  • Coverage: 241.0
  • Bit_score: 73
  • Evalue 3.60e-10

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Taxonomy

Thermomonospora curvata → Thermomonospora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 648
GTGGACTTCCTGCGCCGTCACCTCACGTACGCCAACATCGCCGCGACGCTCGCCCTCTTCCTCGCCCTCGGCGGCGGCGCCTACGCGGCCACCCAACTGCCCCGCAACTCGGTCGACACCGCCCAGCTGAAGAAGGAAGCGGTGACCGCGGGCAAGATCGCCAAGAAGACCCGCGCCCAGCTGCAGGGCGCGCGCGGTCCGGCGGGCGCCCAAGGCCCGCAGGGCAAGACCGGCAAGCCGGGCCCGAAAGGCGCGACCGGCGCCAGGGGCGCGCAGGGCATCCAGGGCCCGAAAGGCGAAGCCGGCGACCTGCCGGCATTCGAAGTCTTCGGCACCGCGAAGCCGATCGCGCCGACCGCCGCCCCGGTCCTCGCCGAGAACCTCGCCGCCGGCTCCTACGTCGTCAGCGCCAACGTCGTCATCGAAGCGACGGCGGAAAGCACCGTCGCCTGCACGCTGAACGGCGGCGGCGAAGCGGTCGCCACCCTCGGCGCCGCCAAAGTGACGACCCTGTCCCTCTCAGCGGCCCGCAGCCTGACCACCGCGGGCCCCGCGATCCTCACCTGCTCGGCGAGCGGCGCGGCCACCGCGAAGTACGCCAACCTGGTTGCGATCCAGGTCAAAGCCCAGTCCCGCGTCCCCGGCTAG
PROTEIN sequence
Length: 216
VDFLRRHLTYANIAATLALFLALGGGAYAATQLPRNSVDTAQLKKEAVTAGKIAKKTRAQLQGARGPAGAQGPQGKTGKPGPKGATGARGAQGIQGPKGEAGDLPAFEVFGTAKPIAPTAAPVLAENLAAGSYVVSANVVIEATAESTVACTLNGGGEAVATLGAAKVTTLSLSAARSLTTAGPAILTCSASGAATAKYANLVAIQVKAQSRVPG*