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scnpilot_solids2_trim150_scaffold_275_curated_6

Organism: solids_Actinobacteria_3

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: comp(3827..4858)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2NCV1_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 53.8
  • Coverage: 333.0
  • Bit_score: 332
  • Evalue 3.70e-88
Permease component of ribose/xylose/arabinose/galactoside ABC-type transporter {ECO:0000313|EMBL:EXG82734.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.3
  • Coverage: 317.0
  • Bit_score: 274
  • Evalue 2.20e-70
inner-membrane translocator similarity KEGG
DB: KEGG
  • Identity: 36.1
  • Coverage: 324.0
  • Bit_score: 173
  • Evalue 9.10e-41

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Taxonomy

Cryptosporangium arvum → Cryptosporangium → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1032
ATGAGCGGGCGCCGGCGGCTGGGGCGTTGGTTGCGCCCGGAAGCGATGGTCCGGGTCCTCTCCTTCGCCGTGGTCCTTGCCGCCTACCTCCTGACGCCCGTCTACCACGACCACTCGCTGAGCGATTTCGACGTCTTCAACACCCTGCAGGGCTTCGCCTCGCTGGGCCTGATCGCGCTGGCCCTGGGACTGACGATCATCGCCGCCGAGTTCGACGTCTCGGTGCTCGGGATGCAGGCGCTCGGCGGCGTGCTCGCGGTCAAGGCGGGGGCCGACAGCGGCCTCCTCGGGGTGCTGGCCGCGACCGCGGCCTGCGCGTTCCTCGGCGCCGTCCAGGGCGGCGTGATCGCGAAGCTCCGGATCCAGTCGATGTCGGTCACGATCGGCACCTACATCGCCCTGCTCGGCCTCACCAATGTGATCGCCGGCAACGAAACCCTCACCTTCACCAACACCGGCGCCGCGATCTGGATCAACCAGACGGTGGCCAGCTTCTTCTCGCCGCGCAGCCTGATCGCGCTCGGCGTCTTCGCCCTGGTGATGCTCGTCGTCGGGGCGACGCGGATCGGGCCGGAGCTGCGGGCGCTCGGCGGGGACCGGCGCGCCGGCCGCGTCGCGGGCGTGCCGGTCGACCGCCGCCTCACCGCGCTCTTCGCGGTCAGCGGCGCGCTTGCCGGCCTGGCCGGCGCGATGCTCGCCTACTCGAACGCGAGCGCCTCCCTCAACCCCGGCCTCGGCCCGCTCGTCCTCGCCGCCGCGGCGGCGGTGCTCGGCGGGCTCAGCCTGCGCGGCGGCCGCGGCGCGATCTGGGGGCTGCTGCTCGGCGCCCTCGCCGTCGCCCTGCTCGAACAGGTCTTCACGGTCACCGCGCTCCCCGCCTCGAGCGCCCAGATCGTCTTCGGATCCCTTCTCCTGGTCGTCGTGGTCGTCGACGCCCCCGACCTGCGCTCCTCGCTGGCGCGGTTGCAGGCGCGACGCGCTTCGATGCGCCAACTTCCACACGAGATAAAACCCAAAGCGCAACGGAGCTGA
PROTEIN sequence
Length: 344
MSGRRRLGRWLRPEAMVRVLSFAVVLAAYLLTPVYHDHSLSDFDVFNTLQGFASLGLIALALGLTIIAAEFDVSVLGMQALGGVLAVKAGADSGLLGVLAATAACAFLGAVQGGVIAKLRIQSMSVTIGTYIALLGLTNVIAGNETLTFTNTGAAIWINQTVASFFSPRSLIALGVFALVMLVVGATRIGPELRALGGDRRAGRVAGVPVDRRLTALFAVSGALAGLAGAMLAYSNASASLNPGLGPLVLAAAAAVLGGLSLRGGRGAIWGLLLGALAVALLEQVFTVTALPASSAQIVFGSLLLVVVVVDAPDLRSSLARLQARRASMRQLPHEIKPKAQRS*