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scnpilot_solids2_trim150_scaffold_3966_curated_8

Organism: solids_Actinobacteria_3

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: 5324..5692

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1A9_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 41.0
  • Coverage: 134.0
  • Bit_score: 77
  • Evalue 7.70e-12
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 41.0
  • Coverage: 134.0
  • Bit_score: 77
  • Evalue 2.40e-12
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB52072.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.0
  • Coverage: 134.0
  • Bit_score: 77
  • Evalue 1.10e-11

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Taxonomy

Conexibacter woesei → Conexibacter → Solirubrobacterales → Thermoleophilia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 369
TTGCTCCGCGCCTGGCGTGGACGCTCGAGCCTGCGCGACGCGGCAAGCCGCAAGTCGTGGCTGGCGACGATCCTCCGCAACGAGGCCTACCGCTACTACTCGCGGCCGCGCCCCGATCCGACCGACCTGCTGGAGGTCTACGAGGGCCGCGAGGACGAGCTGGTGCTCTCGACCGTCGACCGGTTCTTCCTGCAGGAGGCGCTGGAAGGCCTGTCGGAGCGCGAGCGGGTGCTGCTGGCGCTGCGCTACGAGGAGGACCTGACCCAGTCCGCGATCGCCGCCCGGCTGGGGATCCCGGAGGGGACGGTCAAAGTGCAGCTGCACCGGGCACGGATGAAGCTGCGCCGCGCTTATGCGGTCTCGGCGTAG
PROTEIN sequence
Length: 123
LLRAWRGRSSLRDAASRKSWLATILRNEAYRYYSRPRPDPTDLLEVYEGREDELVLSTVDRFFLQEALEGLSERERVLLALRYEEDLTQSAIAARLGIPEGTVKVQLHRARMKLRRAYAVSA*